RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 RAB11FIP4Q86YS3 637 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 CMTR1Q8N1G2 835 aaKnown RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 DHX38Q92620 1227 aaKnown RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 COL26A1Q96A83 441 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 TIFAQ96CG3 184 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 HINFPQ9BQA5 517 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 RBCK1Q9BYM8 510 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 LRRC2Q9BYS8 371 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 MAP3K20Q9NYL2 800 aaKnown RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 YBX2Q9Y2T7 364 aaKnown RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 MRVI1Q9Y6F6 885 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 CHD9Q3L8U1 2897 aa8.4□□□□□ -1.07
SSR1-206ENST00000479365 FRMPD4Q14CM0 1322 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 TMEM265A0A087WTH1 108 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 A0A1W2PRU2 124 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 MEN1O00255 615 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 SUPT20HL2P0C7V6 817 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 ZNF286BP0CG31 522 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 HOXD8P13378 290 aaPredicted RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 UBA1P22314 1058 aaKnown RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 ERCC5P28715 1186 aaPredicted RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 MRPS9P82933 396 aaKnown RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 PTPN11Q06124 597 aaPredicted RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 GPNMBQ14956 572 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 BMP2KLQ5H9B9 411 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 GDF6Q6KF10 455 aaPredicted RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 CENPQQ7L2Z9 268 aaPredicted RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 SRBD1Q8N5C6 995 aaKnown RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 SAMD3Q8N6K7 520 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 TSEN2Q8NCE0 465 aaKnown RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 MAFAQ8NHW3 353 aaPredicted RBP8.39□□□□□ -1.07
SSR1-206ENST00000479365 PPTC7Q8NI37 304 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 HELQQ8TDG4 1101 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 SPATA32Q96LK8 384 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 MAP3K14Q99558 947 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 ZNF576Q9H609 170 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 TELO2Q9Y4R8 837 aa8.39□□□□□ -1.07
SSR1-206ENST00000479365 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 hCG_1642624A0A1W2PR95 340 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 SOBPA7XYQ1 873 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 HAS3O00219 553 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 MEIS2O14770 477 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 SCAMP3O14828 347 aaKnown RBP8.38□□□□□ -1.07
SSR1-206ENST00000479365 GGPS1O95749 300 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 F2P00734 622 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 IQCF3P0C7M6 154 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 MYOGP15173 224 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 FOSL2P15408 326 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 CASTP20810 708 aaKnown RBP8.38□□□□□ -1.07
SSR1-206ENST00000479365 MCM5P33992 734 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 LIFRP42702 1097 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
SSR1-206ENST00000479365 RABGGTBP53611 331 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 LAMC2Q13753 1193 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 PTGISQ16647 500 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 DGKDQ16760 1214 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 TCTN1Q2MV58 587 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 HSDL1Q3SXM5 330 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 CELF3Q5SZQ8 465 aaKnown RBP8.38□□□□□ -1.07
SSR1-206ENST00000479365 USP17L6PQ6QN14 398 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 CASC1Q6TDU7 716 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 DEFB128Q7Z7B8 93 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 SESTD1Q86VW0 696 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 DHX37Q8IY37 1157 aaKnown RBP8.38□□□□□ -1.07
SSR1-206ENST00000479365 USP38Q8NB14 1042 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 CTCFLQ8NI51 663 aaPredicted RBP8.38□□□□□ -1.07
SSR1-206ENST00000479365 WNT8BQ93098 351 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 RRP36Q96EU6 259 aaKnown RBP8.38□□□□□ -1.07
SSR1-206ENST00000479365 TCEANC2Q96MN5 208 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 ALG1Q9BT22 464 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 MTA3Q9BTC8 594 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 NKX2-4Q9H2Z4 354 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 ETNK1Q9HBU6 452 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 POLMQ9NP87 494 aaPredicted RBP8.38□□□□□ -1.07
SSR1-206ENST00000479365 HDAC6Q9UBN7 1215 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 MYH6P13533 1939 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 KIAA1217Q5T5P2 1943 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 A0A0C4DFX4 3053 aa8.38□□□□□ -1.07
SSR1-206ENST00000479365 BAZ2BQ9UIF8 2168 aaKnown RBP8.37□□□□□ -1.07
SSR1-206ENST00000479365 CCDC69A6NI79 296 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 DLL1O00548 723 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 IL2RAP01589 272 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
SSR1-206ENST00000479365 SMARCA1P28370 1054 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 CCND2P30279 289 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 ZNF200P98182 395 aaPredicted RBP8.37□□□□□ -1.07
SSR1-206ENST00000479365 EXOSC10Q01780 885 aaKnown RBP8.37□□□□□ -1.07
SSR1-206ENST00000479365 ADGRE1Q14246 886 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 KIAA0753Q2KHM9 967 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 TRIM71Q2Q1W2 868 aaKnown RBP8.37□□□□□ -1.07
SSR1-206ENST00000479365 ADCK5Q3MIX3 580 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 NFXL1Q6ZNB6 911 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 TMTC3Q6ZXV5 915 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 TMC7Q7Z402 723 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 SGMS1Q86VZ5 419 aa8.37□□□□□ -1.07
SSR1-206ENST00000479365 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSR1-206ENST00000479365 RPUSD2Q8IZ73 545 aaKnown RBP8.37□□□□□ -1.07
SSR1-206ENST00000479365 TMEM87BQ96K49 555 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms