RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 USP17L6PQ6QN14 398 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 CHSY3Q70JA7 882 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 ANKRD23Q86SG2 305 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 RGL4Q8IZJ4 473 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 MB21D1Q8N884 522 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 CLEC4DQ8WXI8 215 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 P2RX7Q99572 595 aaKnown RBP7.57□□□□□ -1.2
USP48-208ENST00000479177 TEX13BQ9BXU2 312 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 GSX2Q9BZM3 304 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 LMBRD1Q9NUN5 540 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 HOXC10Q9NYD6 342 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 NOP53Q9NZM5 478 aaKnown RBP7.57□□□□□ -1.2
USP48-208ENST00000479177 BIN2Q9UBW5 565 aaPredicted RBP7.57□□□□□ -1.2
USP48-208ENST00000479177 CFAP45Q9UL16 551 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 NOL7Q9UMY1 257 aaKnown RBP7.57□□□□□ -1.2
USP48-208ENST00000479177 SLC45A1Q9Y2W3 748 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 CTDP1Q9Y5B0 961 aaPredicted RBP7.57□□□□□ -1.2
USP48-208ENST00000479177 CLIC4Q9Y696 253 aa7.57□□□□□ -1.2
USP48-208ENST00000479177 MORC2Q9Y6X9 1032 aaPredicted RBP7.57□□□□□ -1.2
USP48-208ENST00000479177 PIK3R2O00459 728 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 NFIBO00712 420 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 ALAS1P13196 640 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 PTMSP20962 102 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 GATA4P43694 442 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 HSD17B4P51659 736 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 ARSDP51689 593 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 ZNF157P51786 506 aaPredicted RBP7.56□□□□□ -1.2
USP48-208ENST00000479177 CEBPZQ03701 1054 aaKnown RBP7.56□□□□□ -1.2
USP48-208ENST00000479177 SF3A1Q15459 793 aaKnown RBP7.56□□□□□ -1.2
USP48-208ENST00000479177 INF2Q27J81 1249 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 TKFCQ3LXA3 575 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 MUM1L1Q5H9M0 696 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 MCTP2Q6DN12 878 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 CPXCR1Q8N123 301 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 FAM43AQ8N2R8 423 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 LINC00301Q8NCQ3 95 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 GTF3C2Q8WUA4 911 aaPredicted RBP7.56□□□□□ -1.2
USP48-208ENST00000479177 HHIPL1Q96JK4 782 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 PGBD1Q96JS3 809 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 SPATA32Q96LK8 384 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 MDFIQ99750 246 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 KRTAP9-9Q9BYP9 154 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 KRTAP9-4Q9BYQ2 154 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 ANO3Q9BYT9 981 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 HOMER2Q9NSB8 354 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 RNF146Q9NTX7 359 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 BTBD7Q9P203 1132 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 RCOR1Q9UKL0 485 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 RIPK3Q9Y572 518 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 PCDHB6Q9Y5E3 794 aa7.56□□□□□ -1.2
USP48-208ENST00000479177 FRMPD4Q14CM0 1322 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 ADGRA2Q96PE1 1338 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 MANSC4A6NHS7 340 aaPredicted RBP7.55□□□□□ -1.2
USP48-208ENST00000479177 FAM155AB1AL88 458 aaPredicted RBP7.55□□□□□ -1.2
USP48-208ENST00000479177 GCOM1H8Y6P7 765 aaPredicted RBP7.55□□□□□ -1.2
USP48-208ENST00000479177 PDHXO00330 501 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 SPTLC2O15270 562 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 EDIL3O43854 480 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 PEX10O60683 326 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 PRPF40AO75400 957 aaKnown RBP7.55□□□□□ -1.2
USP48-208ENST00000479177 BMP15O95972 392 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 CFBP00751 764 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 FOSP01100 380 aaPredicted RBP7.55□□□□□ -1.2
USP48-208ENST00000479177 POLR2MP0CAP2 368 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 ATP2B1P20020 1258 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 HOXA13P31271 388 aaPredicted RBP7.55□□□□□ -1.2
USP48-208ENST00000479177 SREBF1P36956 1147 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 STAT3P40763 770 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 ORC2Q13416 577 aaPredicted RBP7.55□□□□□ -1.2
USP48-208ENST00000479177 SLC39A14Q15043 492 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 STK38Q15208 465 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 NKAPLQ5M9Q1 402 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 SLC30A10Q6XR72 485 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 NEK8Q86SG6 692 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 ATCAYQ86WG3 371 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 MCF2L2Q86YR7 1114 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 RIOX2Q8IUF8 465 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 SAMD3Q8N6K7 520 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 KCNG4Q8TDN1 519 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 TBCKQ8TEA7 893 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 CRYGNQ8WXF5 182 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 TBC1D5Q92609 795 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 PTPN18Q99952 460 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 SPATC1LQ9H0A9 340 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 ACAD9Q9H845 621 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 TXNRD2Q9NNW7 524 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 AVENQ9NQS1 362 aaPredicted RBP7.55□□□□□ -1.2
USP48-208ENST00000479177 ZFATQ9P243 1243 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 ABT1Q9ULW3 272 aaKnown RBP7.55□□□□□ -1.2
USP48-208ENST00000479177 RABGAP1Q9Y3P9 1069 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 THSD7BQ9C0I4 1608 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 LRRC37A2A6NM11 1700 aa7.55□□□□□ -1.2
USP48-208ENST00000479177 RPTORQ8N122 1335 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 SCO2A0A1W2PP80 73 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 SPDYE3A6NKU9 549 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 IGF2BP3O00425 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
USP48-208ENST00000479177 PPP6R2O75170 966 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 SIN3BO75182 1162 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 GADD45BO75293 160 aaPredicted RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 CYP2C8P10632 490 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms