RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 LPIN1Q14693 890 aa17.9■□□□□ 0.46
GARNL3-215ENST00000478702 PLA2G4DQ86XP0 818 aa17.9■□□□□ 0.46
GARNL3-215ENST00000478702 ADHFE1Q8IWW8 467 aa17.9■□□□□ 0.46
GARNL3-215ENST00000478702 BLIDQ8IZY5 108 aa17.9■□□□□ 0.46
GARNL3-215ENST00000478702 SEPT1Q8WYJ6 367 aa17.9■□□□□ 0.46
GARNL3-215ENST00000478702 CLP1Q92989 425 aaKnown RBP17.9■□□□□ 0.46
GARNL3-215ENST00000478702 ZNF689Q96CS4 500 aaPredicted RBP17.9■□□□□ 0.46
GARNL3-215ENST00000478702 UIMC1Q96RL1 719 aa17.9■□□□□ 0.46
GARNL3-215ENST00000478702 M0R2N6 131 aa17.89■□□□□ 0.45
GARNL3-215ENST00000478702 ENPP3O14638 875 aa17.89■□□□□ 0.45
GARNL3-215ENST00000478702 CIITAP33076 1130 aa17.89■□□□□ 0.45
GARNL3-215ENST00000478702 GTF2F1P35269 517 aaKnown RBP eCLIP17.89■□□□□ 0.45
GARNL3-215ENST00000478702 ST3GAL1Q11201 340 aa17.89■□□□□ 0.45
GARNL3-215ENST00000478702 GALNT17Q6IS24 598 aa17.89■□□□□ 0.45
GARNL3-215ENST00000478702 NECAB1Q8N987 351 aa17.89■□□□□ 0.45
GARNL3-215ENST00000478702 KIF2CQ99661 725 aa17.89■□□□□ 0.45
GARNL3-215ENST00000478702 C22orf23Q9BZE7 217 aa17.89■□□□□ 0.45
GARNL3-215ENST00000478702 LMAN2LQ9H0V9 348 aa17.89■□□□□ 0.45
GARNL3-215ENST00000478702 MBTPS2O43462 519 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 EDIL3O43854 480 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 TBX10O75333 385 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 RBM25P49756 843 aaKnown RBP17.88■□□□□ 0.45
GARNL3-215ENST00000478702 ACTR2P61160 394 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 CAMK1Q14012 370 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 SMAD2Q15796 467 aaKnown RBP17.88■□□□□ 0.45
GARNL3-215ENST00000478702 CLUL1Q15846 466 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 CSPP1Q1MSJ5 1256 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 MARCH8Q5T0T0 291 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 LINC01599Q8WXQ3 324 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 LENG9Q96B70 501 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 PCYT2Q99447 389 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 C11orf84Q9BUA3 381 aaPredicted RBP17.88■□□□□ 0.45
GARNL3-215ENST00000478702 PHF20Q9BVI0 1012 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 ERAP1Q9NZ08 941 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 ORC3Q9UBD5 711 aaPredicted RBP17.88■□□□□ 0.45
GARNL3-215ENST00000478702 FAM50BQ9Y247 325 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 KMT2EQ8IZD2 1858 aa17.88■□□□□ 0.45
GARNL3-215ENST00000478702 MBLAC1A4D2B0 266 aaPredicted RBP17.87■□□□□ 0.45
GARNL3-215ENST00000478702 IPO5O00410 1097 aaKnown RBP17.87■□□□□ 0.45
GARNL3-215ENST00000478702 LINC01565O15544 149 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 DHX15O43143 795 aaKnown RBP17.87■□□□□ 0.45
GARNL3-215ENST00000478702 NCK2O43639 380 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 DTNBO60941 627 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 DGKIO75912 1065 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 PRR16Q569H4 304 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 FBXO47Q5MNV8 452 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 TAF2Q6P1X5 1199 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 NSUN7Q8NE18 718 aaKnown RBP17.87■□□□□ 0.45
GARNL3-215ENST00000478702 DNAJB3Q8WWF6 145 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 WASF1Q92558 559 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 FBXL18Q96ME1 805 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 SMARCAD1Q9H4L7 1026 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 AGO3Q9H9G7 860 aaKnown RBP17.87■□□□□ 0.45
GARNL3-215ENST00000478702 KCNJ14Q9UNX9 436 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 RWDD3Q9Y3V2 267 aa17.87■□□□□ 0.45
GARNL3-215ENST00000478702 DDX39AO00148 427 aaKnown RBP17.86■□□□□ 0.45
GARNL3-215ENST00000478702 CSPG5O95196 566 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 ATG7O95352 703 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 CCNE2O96020 404 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 MMP1P03956 469 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 FDPSP14324 419 aaKnown RBP17.86■□□□□ 0.45
GARNL3-215ENST00000478702 XBP1P17861 261 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 MARK3P27448 753 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 USP11P51784 963 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 NHLH1Q02575 133 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 PPFIA1Q13136 1202 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 GRIK4Q16099 956 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 HFE2Q6ZVN8 426 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 RTN4RL1Q86UN2 441 aaPredicted RBP17.86■□□□□ 0.45
GARNL3-215ENST00000478702 CRIPAKQ8N1N5 446 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 TBCKQ8TEA7 893 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 GLG1Q92896 1179 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 ZBTB10Q96DT7 871 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 ZNF577Q9BSK1 485 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 ALG13Q9NP73 1137 aaKnown RBP17.86■□□□□ 0.45
GARNL3-215ENST00000478702 TUBE1Q9UJT0 475 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 CDY2AQ9Y6F7 541 aa17.86■□□□□ 0.45
GARNL3-215ENST00000478702 DNAJB1P25685 340 aa17.85■□□□□ 0.45
GARNL3-215ENST00000478702 BTG3Q14201 252 aaPredicted RBP17.85■□□□□ 0.45
GARNL3-215ENST00000478702 TSHZ1Q6ZSZ6 1077 aa17.85■□□□□ 0.45
GARNL3-215ENST00000478702 KRT25Q7Z3Z0 450 aa17.85■□□□□ 0.45
GARNL3-215ENST00000478702 AZI2Q9H6S1 392 aa17.85■□□□□ 0.45
GARNL3-215ENST00000478702 GJB4Q9NTQ9 266 aa17.85■□□□□ 0.45
GARNL3-215ENST00000478702 TBC1D22BQ9NU19 505 aa17.85■□□□□ 0.45
GARNL3-215ENST00000478702 MUTYHQ9UIF7 546 aa17.85■□□□□ 0.45
GARNL3-215ENST00000478702 PLAGL2Q9UPG8 496 aa17.85■□□□□ 0.45
GARNL3-215ENST00000478702 LIMCH1Q9UPQ0 1083 aa17.85■□□□□ 0.45
GARNL3-215ENST00000478702 IGKV6D-21A0A0A0MT36 114 aa17.84■□□□□ 0.45
GARNL3-215ENST00000478702 CD52P31358 61 aa17.84■□□□□ 0.45
GARNL3-215ENST00000478702 MRE11P49959 708 aa17.84■□□□□ 0.45
GARNL3-215ENST00000478702 ADAM15Q13444 863 aa17.84■□□□□ 0.45
GARNL3-215ENST00000478702 SMAD4Q13485 552 aaKnown RBP17.84■□□□□ 0.45
GARNL3-215ENST00000478702 NONOQ15233 471 aaKnown RBP eCLIP17.84■□□□□ 0.45
GARNL3-215ENST00000478702 ZNF746Q6NUN9 644 aaPredicted RBP17.84■□□□□ 0.45
GARNL3-215ENST00000478702 MOXD1Q6UVY6 613 aa17.84■□□□□ 0.45
GARNL3-215ENST00000478702 PLPPR4Q7Z2D5 763 aa17.84■□□□□ 0.45
GARNL3-215ENST00000478702 PLVAPQ9BX97 442 aa17.84■□□□□ 0.45
GARNL3-215ENST00000478702 IGFLR1Q9H665 355 aa17.84■□□□□ 0.45
GARNL3-215ENST00000478702 MRPL42Q9Y6G3 142 aaKnown RBP17.84■□□□□ 0.45
GARNL3-215ENST00000478702 MSH4O15457 936 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms