RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 ZNF484Q5JVG2 852 aa21.2■□□□□ 0.98
SREBF1-212ENST00000478616 FAM117BQ6P1L5 589 aa21.2■□□□□ 0.98
SREBF1-212ENST00000478616 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
SREBF1-212ENST00000478616 CRIPAKQ8N1N5 446 aa21.2■□□□□ 0.98
SREBF1-212ENST00000478616 TMEM40Q8WWA1 233 aa21.2■□□□□ 0.98
SREBF1-212ENST00000478616 BBXQ8WY36 941 aaPredicted RBP21.2■□□□□ 0.98
SREBF1-212ENST00000478616 TEKT3Q9BXF9 490 aa21.2■□□□□ 0.98
SREBF1-212ENST00000478616 KDM3AQ9Y4C1 1321 aa21.2■□□□□ 0.98
SREBF1-212ENST00000478616 CCDC194A0A1B0GVG4 234 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 TLL1O43897 1013 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 EFCAB14O75071 495 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 CD52P31358 61 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 KRT2P35908 639 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 SPIRE1Q08AE8 756 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 TARBP2Q15633 366 aaKnown RBP21.19■□□□□ 0.98
SREBF1-212ENST00000478616 TRMT1LQ7Z2T5 733 aaKnown RBP21.19■□□□□ 0.98
SREBF1-212ENST00000478616 SP7Q8TDD2 431 aaPredicted RBP21.19■□□□□ 0.98
SREBF1-212ENST00000478616 TOP1MTQ969P6 601 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 TMX1Q9H3N1 280 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 RC3H2Q9HBD1 1191 aaKnown RBP21.19■□□□□ 0.98
SREBF1-212ENST00000478616 WRAP73Q9P2S5 460 aaPredicted RBP21.19■□□□□ 0.98
SREBF1-212ENST00000478616 TRPV2Q9Y5S1 764 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 A0A0C4DFX4 3053 aa21.19■□□□□ 0.98
SREBF1-212ENST00000478616 LINC01553A4QN01 128 aa21.18■□□□□ 0.98
SREBF1-212ENST00000478616 OATP04181 439 aa21.18■□□□□ 0.98
SREBF1-212ENST00000478616 LINC00271P0C7V0 271 aa21.18■□□□□ 0.98
SREBF1-212ENST00000478616 PRKCEQ02156 737 aa21.18■□□□□ 0.98
SREBF1-212ENST00000478616 DIS3L2Q8IYB7 885 aaKnown RBP21.18■□□□□ 0.98
SREBF1-212ENST00000478616 MYOCDQ8IZQ8 938 aa21.18■□□□□ 0.98
SREBF1-212ENST00000478616 WASF1Q92558 559 aa21.18■□□□□ 0.98
SREBF1-212ENST00000478616 CELF4Q9BZC1 486 aaKnown RBP21.18■□□□□ 0.98
SREBF1-212ENST00000478616 RALGAPA2Q2PPJ7 1873 aa21.18■□□□□ 0.98
SREBF1-212ENST00000478616 VCANP13611 3396 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 ENPP3O14638 875 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 GPR32O75388 356 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 SFNP31947 248 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 JAK3P52333 1124 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 GUCY1B3Q02153 619 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 PPP2R5CQ13362 524 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 DRP2Q13474 957 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 TSHZ1Q6ZSZ6 1077 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 APBB2Q92870 758 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 RAD9AQ99638 391 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 PRDM6Q9NQX0 595 aa21.17■□□□□ 0.98
SREBF1-212ENST00000478616 FNDC1Q4ZHG4 1894 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-212ENST00000478616 CCNT1O60563 726 aaKnown RBP21.16■□□□□ 0.98
SREBF1-212ENST00000478616 XBP1P17861 261 aa21.16■□□□□ 0.98
SREBF1-212ENST00000478616 MIER3Q7Z3K6 550 aa21.16■□□□□ 0.98
SREBF1-212ENST00000478616 RSPH3Q86UC2 560 aa21.16■□□□□ 0.98
SREBF1-212ENST00000478616 RDM1Q8NG50 284 aa21.16■□□□□ 0.98
SREBF1-212ENST00000478616 SH2D3AQ9BRG2 576 aa21.16■□□□□ 0.98
SREBF1-212ENST00000478616 PADI3Q9ULW8 664 aa21.16■□□□□ 0.98
SREBF1-212ENST00000478616 NOC2LQ9Y3T9 749 aaKnown RBP21.16■□□□□ 0.98
SREBF1-212ENST00000478616 SAMM50Q9Y512 469 aa21.16■□□□□ 0.98
SREBF1-212ENST00000478616 SQORQ9Y6N5 450 aa21.16■□□□□ 0.98
SREBF1-212ENST00000478616 MGEA5O60502 916 aa21.15■□□□□ 0.98
SREBF1-212ENST00000478616 AMHP03971 560 aa21.15■□□□□ 0.98
SREBF1-212ENST00000478616 POU3F3P20264 500 aaPredicted RBP21.15■□□□□ 0.98
SREBF1-212ENST00000478616 CLCN3P51790 818 aa21.15■□□□□ 0.98
SREBF1-212ENST00000478616 TMEM266Q2M3C6 531 aa21.15■□□□□ 0.98
SREBF1-212ENST00000478616 CKAP2LQ8IYA6 745 aa21.15■□□□□ 0.98
SREBF1-212ENST00000478616 NME8Q8N427 588 aa21.15■□□□□ 0.98
SREBF1-212ENST00000478616 LRRC71Q8N4P6 559 aa21.15■□□□□ 0.98
SREBF1-212ENST00000478616 BANK1Q8NDB2 785 aa21.15■□□□□ 0.98
SREBF1-212ENST00000478616 LLPHQ9BRT6 129 aaKnown RBP21.15■□□□□ 0.98
SREBF1-212ENST00000478616 NIFKQ9BYG3 293 aaKnown RBP21.15■□□□□ 0.98
SREBF1-212ENST00000478616 ERVK-5Q9HDB9 667 aa21.15■□□□□ 0.98
SREBF1-212ENST00000478616 BRWD1Q9NSI6 2320 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 IGKV6-21A0A0C4DH24 114 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 VTNP04004 478 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 GCFC2P16383 781 aaKnown RBP21.14■□□□□ 0.97
SREBF1-212ENST00000478616 ERVK-21P61565 698 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 IER5Q5VY09 327 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 ANO5Q75V66 913 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 ZNF579Q8NAF0 562 aaKnown RBP21.14■□□□□ 0.97
SREBF1-212ENST00000478616 SLC17A8Q8NDX2 589 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 ARNTL2Q8WYA1 636 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 TNPO1Q92973 898 aaKnown RBP21.14■□□□□ 0.97
SREBF1-212ENST00000478616 FAM20AQ96MK3 541 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 PPP1R16BQ96T49 567 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 ADAMTS10Q9H324 1103 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 MTCH2Q9Y6C9 303 aa21.14■□□□□ 0.97
SREBF1-212ENST00000478616 KIF28PB7ZC32 967 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 TBX3O15119 743 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 UPP2O95045 317 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 GRB10Q13322 594 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 KIZQ2M2Z5 673 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 FAM167AQ96KS9 214 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 ZSCAN31Q96LW9 406 aaPredicted RBP21.13■□□□□ 0.97
SREBF1-212ENST00000478616 TBC1D32Q96NH3 1257 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 MTMR9Q96QG7 549 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 C17orf80Q9BSJ5 609 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 ZBED2Q9BTP6 218 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 TMEM60Q9H2L4 133 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 SUGCTQ9HAC7 445 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 MYO7AQ13402 2215 aa21.13■□□□□ 0.97
SREBF1-212ENST00000478616 RPLP2P05387 115 aaKnown RBP21.12■□□□□ 0.97
SREBF1-212ENST00000478616 RABEP1Q15276 862 aa21.12■□□□□ 0.97
SREBF1-212ENST00000478616 EFCAB12Q6NXP0 572 aa21.12■□□□□ 0.97
SREBF1-212ENST00000478616 FAM228AQ86W67 206 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms