RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ZNF396Q96N95 335 aaPredicted RBP30.01■■■□□ 2.39
CCM2-211ENST00000478582 USP28Q96RU2 1077 aa30.01■■■□□ 2.39
CCM2-211ENST00000478582 POLR3CQ9BUI4 534 aaPredicted RBP30.01■■■□□ 2.39
CCM2-211ENST00000478582 WRAP73Q9P2S5 460 aaPredicted RBP30.01■■■□□ 2.39
CCM2-211ENST00000478582 LRWD1Q9UFC0 647 aa30.01■■■□□ 2.39
CCM2-211ENST00000478582 STK24Q9Y6E0 443 aa30.01■■■□□ 2.39
CCM2-211ENST00000478582 PFKMP08237 780 aa30■■■□□ 2.39
CCM2-211ENST00000478582 IQCF3P0C7M6 154 aa30■■■□□ 2.39
CCM2-211ENST00000478582 TRIM71Q2Q1W2 868 aaKnown RBP30■■■□□ 2.39
CCM2-211ENST00000478582 FTOQ9C0B1 505 aaKnown RBP eCLIP30■■■□□ 2.39
CCM2-211ENST00000478582 MTIF3Q9H2K0 278 aaKnown RBP30■■■□□ 2.39
CCM2-211ENST00000478582 TUFT1Q9NNX1 390 aa30■■■□□ 2.39
CCM2-211ENST00000478582 TUBE1Q9UJT0 475 aa30■■■□□ 2.39
CCM2-211ENST00000478582 TRIP12Q14669 1992 aaPredicted RBP30■■■□□ 2.39
CCM2-211ENST00000478582 SPATA31C1P0DKV0 1188 aa29.99■■■□□ 2.39
CCM2-211ENST00000478582 RFC2P35250 354 aa29.99■■■□□ 2.39
CCM2-211ENST00000478582 NASPP49321 788 aaPredicted RBP29.99■■■□□ 2.39
CCM2-211ENST00000478582 IGBP1P78318 339 aa29.99■■■□□ 2.39
CCM2-211ENST00000478582 CYP4A11Q02928 519 aa29.99■■■□□ 2.39
CCM2-211ENST00000478582 CTTNQ14247 550 aaKnown RBP29.99■■■□□ 2.39
CCM2-211ENST00000478582 TARBP2Q15633 366 aaKnown RBP29.99■■■□□ 2.39
CCM2-211ENST00000478582 ZNF697Q5TEC3 545 aa29.99■■■□□ 2.39
CCM2-211ENST00000478582 ATL3Q6DD88 541 aa29.99■■■□□ 2.39
CCM2-211ENST00000478582 TAF2Q6P1X5 1199 aa29.99■■■□□ 2.39
CCM2-211ENST00000478582 TPH2Q8IWU9 490 aa29.99■■■□□ 2.39
CCM2-211ENST00000478582 TRAPPC12Q8WVT3 735 aa29.99■■■□□ 2.39
CCM2-211ENST00000478582 MUTP22033 750 aa29.98■■■□□ 2.39
CCM2-211ENST00000478582 RPA1P27694 616 aa29.98■■■□□ 2.39
CCM2-211ENST00000478582 SLC39A14Q15043 492 aa29.98■■■□□ 2.39
CCM2-211ENST00000478582 MTHFD1LQ6UB35 978 aa29.98■■■□□ 2.39
CCM2-211ENST00000478582 ANO5Q75V66 913 aa29.98■■■□□ 2.39
CCM2-211ENST00000478582 OTOP2Q7RTS6 562 aa29.98■■■□□ 2.39
CCM2-211ENST00000478582 TRMT1LQ7Z2T5 733 aaKnown RBP29.98■■■□□ 2.39
CCM2-211ENST00000478582 RPAINQ86UA6 219 aa29.98■■■□□ 2.39
CCM2-211ENST00000478582 CATSPER3Q86XQ3 398 aa29.98■■■□□ 2.39
CCM2-211ENST00000478582 PCDHA2Q9Y5H9 948 aa29.98■■■□□ 2.39
CCM2-211ENST00000478582 LAMA2P24043 3122 aaKnown RBP29.98■■■□□ 2.39
CCM2-211ENST00000478582 SCN5AQ14524 2016 aa29.97■■■□□ 2.39
CCM2-211ENST00000478582 DDX11L8A8MPP1 907 aa29.97■■■□□ 2.39
CCM2-211ENST00000478582 KLRC1P26715 233 aa29.97■■■□□ 2.39
CCM2-211ENST00000478582 HAUS3Q68CZ6 603 aa29.97■■■□□ 2.39
CCM2-211ENST00000478582 WNT8BQ93098 351 aa29.97■■■□□ 2.39
CCM2-211ENST00000478582 CXXC1Q9P0U4 656 aaPredicted RBP29.97■■■□□ 2.39
CCM2-211ENST00000478582 VWA3AA6NCI4 1184 aa29.96■■■□□ 2.39
CCM2-211ENST00000478582 CAND2O75155 1236 aa29.96■■■□□ 2.39
CCM2-211ENST00000478582 MED24O75448 989 aa29.96■■■□□ 2.39
CCM2-211ENST00000478582 RPLP2P05387 115 aaKnown RBP29.96■■■□□ 2.39
CCM2-211ENST00000478582 XRCC6P12956 609 aaKnown RBP eCLIP29.96■■■□□ 2.39
CCM2-211ENST00000478582 DEFB128Q7Z7B8 93 aa29.96■■■□□ 2.39
CCM2-211ENST00000478582 AK8Q96MA6 479 aa29.96■■■□□ 2.39
CCM2-211ENST00000478582 CEP89Q96ST8 783 aa29.96■■■□□ 2.39
CCM2-211ENST00000478582 SEPT9Q9UHD8 586 aaPredicted RBP29.96■■■□□ 2.39
CCM2-211ENST00000478582 PPME1Q9Y570 386 aa29.96■■■□□ 2.39
CCM2-211ENST00000478582 KAT6AQ92794 2004 aa29.96■■■□□ 2.39
CCM2-211ENST00000478582 SMIM35A0A1B0GVV1 85 aa29.95■■■□□ 2.39
CCM2-211ENST00000478582 MAGEB2O15479 319 aa29.95■■■□□ 2.39
CCM2-211ENST00000478582 C22orf31O95567 290 aa29.95■■■□□ 2.39
CCM2-211ENST00000478582 YWHABP31946 246 aaKnown RBP29.95■■■□□ 2.39
CCM2-211ENST00000478582 NUCB2P80303 420 aa29.95■■■□□ 2.39
CCM2-211ENST00000478582 CEBPZQ03701 1054 aaKnown RBP29.95■■■□□ 2.39
CCM2-211ENST00000478582 RUFY4Q6ZNE9 571 aa29.95■■■□□ 2.39
CCM2-211ENST00000478582 OTUD6AQ7L8S5 288 aa29.95■■■□□ 2.39
CCM2-211ENST00000478582 SEMA6BQ9H3T3 888 aa29.95■■■□□ 2.39
CCM2-211ENST00000478582 DAXXQ9UER7 740 aaPredicted RBP29.95■■■□□ 2.39
CCM2-211ENST00000478582 TANC1Q9C0D5 1861 aa29.95■■■□□ 2.38
CCM2-211ENST00000478582 CKBP12277 381 aa29.94■■■□□ 2.38
CCM2-211ENST00000478582 SELPP16109 830 aa29.94■■■□□ 2.38
CCM2-211ENST00000478582 LONP1P36776 959 aaKnown RBP29.94■■■□□ 2.38
CCM2-211ENST00000478582 KRT79Q5XKE5 535 aa29.94■■■□□ 2.38
CCM2-211ENST00000478582 LINC00301Q8NCQ3 95 aa29.94■■■□□ 2.38
CCM2-211ENST00000478582 FAM161BQ96MY7 647 aa29.94■■■□□ 2.38
CCM2-211ENST00000478582 ANKEF1Q9NU02 776 aa29.94■■■□□ 2.38
CCM2-211ENST00000478582 TFIP11Q9UBB9 837 aaKnown RBP29.94■■■□□ 2.38
CCM2-211ENST00000478582 SRPRBQ9Y5M8 271 aaKnown RBP29.94■■■□□ 2.38
CCM2-211ENST00000478582 MYH15Q9Y2K3 1946 aa29.94■■■□□ 2.38
CCM2-211ENST00000478582 TMEM265A0A087WTH1 108 aa29.93■■■□□ 2.38
CCM2-211ENST00000478582 TMEM150BA6NC51 233 aa29.93■■■□□ 2.38
CCM2-211ENST00000478582 PARNO95453 639 aaKnown RBP29.93■■■□□ 2.38
CCM2-211ENST00000478582 YEATS4O95619 227 aa29.93■■■□□ 2.38
CCM2-211ENST00000478582 CCT6AP40227 531 aaKnown RBP29.93■■■□□ 2.38
CCM2-211ENST00000478582 LRRC8DQ7L1W4 858 aa29.93■■■□□ 2.38
CCM2-211ENST00000478582 ZBTB10Q96DT7 871 aa29.93■■■□□ 2.38
CCM2-211ENST00000478582 MMTAG2Q9BU76 263 aaKnown RBP29.93■■■□□ 2.38
CCM2-211ENST00000478582 CYP26B1Q9NR63 512 aa29.93■■■□□ 2.38
CCM2-211ENST00000478582 FBXO2Q9UK22 296 aaPredicted RBP29.93■■■□□ 2.38
CCM2-211ENST00000478582 PP2D1A8MPX8 630 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 GRXCR1A8MXD5 290 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 ACTN1P12814 892 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 DNAJB2P25686 324 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 MARCKSP29966 332 aaPredicted RBP29.92■■■□□ 2.38
CCM2-211ENST00000478582 THPOP40225 353 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 MTERF2Q49AM1 385 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 TRAF7Q6Q0C0 670 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 RSPH3Q86UC2 560 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 NME8Q8N427 588 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 SNX29Q8TEQ0 813 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 NACC1Q96RE7 527 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 TTYH1Q9H313 450 aaPredicted RBP29.92■■■□□ 2.38
CCM2-211ENST00000478582 TSHZ2Q9NRE2 1034 aa29.92■■■□□ 2.38
CCM2-211ENST00000478582 CFAP45Q9UL16 551 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms