RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 KLF10Q13118 480 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 CRY1Q16526 586 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 USP39Q53GS9 565 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 FIGNQ5HY92 759 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 FOXB2Q5VYV0 432 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 ZNF662Q6ZS27 426 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 KIAA0907Q7Z7F0 614 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 ZC3H7AQ8IWR0 971 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 SYNPOQ8N3V7 929 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 ZBTB38Q8NAP3 1195 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 ZSWIM2Q8NEG5 633 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 PCDH19Q8TAB3 1148 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 CSRNP2Q9H175 543 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 INCENPQ9NQS7 918 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 FANCLQ9NW38 375 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 ING1Q9UK53 422 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 CBLCQ9ULV8 474 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 PCDHA9Q9Y5H5 950 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 CCDC66A2RUB6 948 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 ANKRD62A6NC57 917 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 ACO1P21399 889 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 GJA4P35212 333 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 ETV4P43268 484 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 FAM47CQ5HY64 1035 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 AGBL4Q5VU57 503 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 RNF207Q6ZRF8 634 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 C16orf86Q6ZW13 317 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 OTOP2Q7RTS6 562 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 CISD2Q8N5K1 135 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 WDR48Q8TAF3 677 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 PCED1AQ9H1Q7 454 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 TMX1Q9H3N1 280 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 CDC42EP3Q9UKI2 254 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 PTCH2Q9Y6C5 1203 aa5.82□□□□□ -1.48
CDC42BPA-212ENST00000478573 CCDC163A0A0D9SF12 145 aa5.81□□□□□ -1.48
CDC42BPA-212ENST00000478573 GSTA4O15217 222 aa5.81□□□□□ -1.48
CDC42BPA-212ENST00000478573 RAD17O75943 681 aa5.81□□□□□ -1.48
CDC42BPA-212ENST00000478573 C16orf59Q7L2K0 433 aa5.81□□□□□ -1.48
CDC42BPA-212ENST00000478573 SCYL1Q96KG9 808 aa5.81□□□□□ -1.48
CDC42BPA-212ENST00000478573 UCKL1Q9NWZ5 548 aa5.81□□□□□ -1.48
CDC42BPA-212ENST00000478573 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.81□□□□□ -1.48
CDC42BPA-212ENST00000478573 ZNF561-AS1K7EIQ3 104 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 ARVCFO00192 962 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 CRTAMO95727 393 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 C4BPAP04003 597 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 C6orf222P0C671 652 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 FAM153BP0C7A2 387 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 NAT1P18440 290 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 GABREP78334 506 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 FOXE3Q13461 319 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 POLNQ7Z5Q5 900 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 EXTL1Q92935 676 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 EXOC2Q96KP1 924 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 FEZ1Q99689 392 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 MENTQ9BUN1 341 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 PLA2G12BQ9BX93 195 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 ZDHHC5Q9C0B5 715 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 GALNT8Q9NY28 637 aa5.8□□□□□ -1.48
CDC42BPA-212ENST00000478573 SCDO00767 359 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 WNT9AO14904 365 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 ARHGAP6O43182 974 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 APPP05067 770 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 MMEP08473 750 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 AOAHP28039 575 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 FHL2Q14192 279 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 TCEA2Q15560 299 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 TBR1Q16650 682 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 LRSAM1Q6UWE0 723 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 LARP4Q71RC2 724 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 FILIP1Q7Z7B0 1213 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 RTKN2Q8IZC4 609 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 EDAQ92838 391 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 SMURF1Q9HCE7 757 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 NDOR1Q9UHB4 597 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 PUF60Q9UHX1 559 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 FBXO10Q9UK96 956 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 FAM184BQ9ULE4 1060 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 PRKAB1Q9Y478 270 aa5.79□□□□□ -1.48
CDC42BPA-212ENST00000478573 OVOL3O00110 214 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 ZNF202O95125 648 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 MEOX1P50221 254 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 DGCR2P98153 550 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 CD83Q01151 205 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 CRB2Q5IJ48 1285 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 USP30Q70CQ3 517 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 OR14K1Q8NGZ2 314 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 FAM89AQ96GI7 184 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 DHRS4Q9BTZ2 278 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 KRTAP17-1Q9BYP8 105 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 SLITRK6Q9H5Y7 841 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 BTBD7Q9P203 1132 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 MRPS23Q9Y3D9 190 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 SLC30A1Q9Y6M5 507 aa5.78□□□□□ -1.48
CDC42BPA-212ENST00000478573 MATN2O00339 956 aa5.77□□□□□ -1.49
CDC42BPA-212ENST00000478573 CLASP2O75122 1294 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-212ENST00000478573 MSX2P35548 267 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-212ENST00000478573 ECE1P42892 770 aa5.77□□□□□ -1.49
CDC42BPA-212ENST00000478573 MRE11P49959 708 aa5.77□□□□□ -1.49
CDC42BPA-212ENST00000478573 HERVK_113P62684 666 aa5.77□□□□□ -1.49
CDC42BPA-212ENST00000478573 PTH1RQ03431 593 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms