RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 NEFHP12036 1026 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 PDE6CP51160 858 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 C17orf53Q8N3J3 647 aaPredicted RBP13.1□□□□□ -0.31
PCCB-214ENST00000478469 RDM1Q8NG50 284 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 NAPGQ99747 312 aaPredicted RBP13.1□□□□□ -0.31
PCCB-214ENST00000478469 BPIFA3Q9BQP9 254 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 MYMKA6NI61 221 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 MAPK4P31152 587 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 PPIL2Q13356 520 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 PDCL2Q8N4E4 241 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 IPO4Q8TEX9 1081 aaKnown RBP13.1□□□□□ -0.31
PCCB-214ENST00000478469 DESI2Q9BSY9 194 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
PCCB-214ENST00000478469 ZNF280AP59817 542 aaPredicted RBP13.1□□□□□ -0.31
PCCB-214ENST00000478469 GOLGA1Q92805 767 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 KCND2Q9NZV8 630 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 HESX1Q9UBX0 185 aa13.1□□□□□ -0.31
PCCB-214ENST00000478469 BZW2Q9Y6E2 419 aaKnown RBP13.1□□□□□ -0.31
PCCB-214ENST00000478469 ARP10275 920 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 ABCB4P21439 1286 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
PCCB-214ENST00000478469 CATSPER3Q86XQ3 398 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 ZNF668Q96K58 619 aaPredicted RBP13.09□□□□□ -0.31
PCCB-214ENST00000478469 FAM81BQ96LP2 452 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 POLR3CQ9BUI4 534 aaPredicted RBP13.09□□□□□ -0.31
PCCB-214ENST00000478469 CPA4Q9UI42 421 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 H2AFZP0C0S5 128 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 FERP16591 822 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 TNNC1P63316 161 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 PRKCEQ02156 737 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 DPYDQ12882 1025 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 H2AFVQ71UI9 128 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 VSTM4Q8IW00 320 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.09□□□□□ -0.31
PCCB-214ENST00000478469 REEP2Q9BRK0 252 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 SLC38A10Q9HBR0 1119 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 MYO1AQ9UBC5 1043 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 GLI3P10071 1580 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 ACTN4O43707 911 aaKnown RBP13.09□□□□□ -0.31
PCCB-214ENST00000478469 RBL2Q08999 1139 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 SEPT7Q16181 437 aaKnown RBP13.09□□□□□ -0.31
PCCB-214ENST00000478469 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
PCCB-214ENST00000478469 PXMP2Q9NR77 195 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 MTUS1Q9ULD2 1270 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 ROBO3Q96MS0 1386 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 FZD9O00144 591 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 RHOBTB3O94955 611 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 NMT1P30419 496 aaKnown RBP13.09□□□□□ -0.31
PCCB-214ENST00000478469 ZBED6P86452 979 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 LAMC2Q13753 1193 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 ZNF568Q3ZCX4 644 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 EARS2Q5JPH6 523 aaKnown RBP13.09□□□□□ -0.31
PCCB-214ENST00000478469 SARM1Q6SZW1 724 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 MOB2Q70IA6 237 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 RNF149Q8NC42 400 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 HPS3Q969F9 1004 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 TUBE1Q9UJT0 475 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 KCNH4Q9UQ05 1017 aa13.09□□□□□ -0.31
PCCB-214ENST00000478469 C5P01031 1676 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 LRRN2O75325 713 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 FCGRTP55899 365 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 SEL1L2Q5TEA6 688 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 PCNX4Q63HM2 1172 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
PCCB-214ENST00000478469 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 ACTR2P61160 394 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 PPFIA1Q13136 1202 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 DNERQ8NFT8 737 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 NXF1Q9UBU9 619 aaKnown RBP13.08□□□□□ -0.32
PCCB-214ENST00000478469 AGTPBP1Q9UPW5 1226 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 NPHP3-ACAD11A0A0J9YXS1 232 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 RGS2P41220 211 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 EFNA5P52803 228 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 STK4Q13043 487 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 CATSPERGQ6ZRH7 1159 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 CICQ96RK0 1608 aaPredicted RBP13.08□□□□□ -0.32
PCCB-214ENST00000478469 MRPL4Q9BYD3 311 aaKnown RBP13.08□□□□□ -0.32
PCCB-214ENST00000478469 HAUS4Q9H6D7 363 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 ANKEF1Q9NU02 776 aa13.08□□□□□ -0.32
PCCB-214ENST00000478469 STRNO43815 780 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 NPEPPSP55786 919 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 PLA2G4FQ68DD2 849 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 SH3BP5LQ7L8J4 393 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 TOPORSQ9NS56 1045 aaPredicted RBP13.07□□□□□ -0.32
PCCB-214ENST00000478469 ERAP1Q9NZ08 941 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 PCDHB4Q9Y5E5 795 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 C4BP0C0L5 1744 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 PITPNM2Q9BZ72 1349 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 LGALS16A8MUM7 142 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 ALDH1A1P00352 501 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 CYP2C8P10632 490 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 TUBB4BP68371 445 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 IFFO1Q0D2I5 559 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 TWF2Q6IBS0 349 aaKnown RBP13.07□□□□□ -0.32
PCCB-214ENST00000478469 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 ZNF354CQ86Y25 554 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 SYCE1Q8N0S2 351 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 UBL4BQ8N7F7 174 aa13.07□□□□□ -0.32
PCCB-214ENST00000478469 FAM213AQ9BRX8 229 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms