RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 EDIL3O43854 480 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 ITGA4P13612 1032 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 KCNA3P22001 575 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 DHX9Q08211 1270 aaKnown RBP16.21■□□□□ 0.19
U2AF1-210ENST00000478282 ECM1Q16610 540 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 C15orf52Q6ZUT6 534 aaKnown RBP16.21■□□□□ 0.19
U2AF1-210ENST00000478282 NELFCDQ8IXH7 590 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 CCDC26Q8TAB7 109 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 SH3RF3Q8TEJ3 882 aaPredicted RBP16.21■□□□□ 0.19
U2AF1-210ENST00000478282 TLCD1Q96CP7 247 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 NAGPAQ9UK23 515 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 BZW2Q9Y6E2 419 aaKnown RBP16.21■□□□□ 0.19
U2AF1-210ENST00000478282 MGRN1O60291 552 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 ATP2C2O75185 946 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 SLC8A1P32418 973 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 FAM114A2Q9NRY5 505 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 TBC1D7Q9P0N9 293 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 JAG2Q9Y219 1238 aa16.21■□□□□ 0.19
U2AF1-210ENST00000478282 F8W031 263 aaPredicted RBP16.21■□□□□ 0.18
U2AF1-210ENST00000478282 TTI1O43156 1089 aa16.21■□□□□ 0.18
U2AF1-210ENST00000478282 SMARCA1P28370 1054 aa16.21■□□□□ 0.18
U2AF1-210ENST00000478282 KCNH2Q12809 1159 aa16.21■□□□□ 0.18
U2AF1-210ENST00000478282 PEX26Q7Z412 305 aa16.21■□□□□ 0.18
U2AF1-210ENST00000478282 ZC3H3Q8IXZ2 948 aaKnown RBP16.21■□□□□ 0.18
U2AF1-210ENST00000478282 CENPTQ96BT3 561 aa16.21■□□□□ 0.18
U2AF1-210ENST00000478282 MIEF2Q96C03 454 aa16.21■□□□□ 0.18
U2AF1-210ENST00000478282 CHMP6Q96FZ7 201 aa16.21■□□□□ 0.18
U2AF1-210ENST00000478282 EIF3BP55884 814 aaKnown RBP16.2■□□□□ 0.18
U2AF1-210ENST00000478282 ERMARDQ5T6L9 678 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 SPTY2D1Q68D10 685 aaPredicted RBP16.2■□□□□ 0.18
U2AF1-210ENST00000478282 ALKBH5Q6P6C2 394 aaKnown RBP16.2■□□□□ 0.18
U2AF1-210ENST00000478282 SLFN11Q7Z7L1 901 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 C7orf43Q8WVR3 580 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 XPO6Q96QU8 1125 aaKnown RBP16.2■□□□□ 0.18
U2AF1-210ENST00000478282 FAM129AQ9BZQ8 928 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 ANKRD2Q9GZV1 360 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 SUCLA2Q9P2R7 463 aaPredicted RBP16.2■□□□□ 0.18
U2AF1-210ENST00000478282 STXBP5LQ9Y2K9 1186 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 ZNF646O15015 1829 aaPredicted RBP16.2■□□□□ 0.18
U2AF1-210ENST00000478282 ATP8B3O60423 1300 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 OPLAHO14841 1288 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 SP8Q8IXZ3 490 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 SPAG5Q96R06 1193 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 KCTD10Q9H3F6 313 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 LRRC4CQ9HCJ2 640 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.2■□□□□ 0.18
U2AF1-210ENST00000478282 PCDHA2Q9Y5H9 948 aa16.2■□□□□ 0.18
U2AF1-210ENST00000478282 ZBTB7AO95365 584 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 ACTN1P12814 892 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 GCFC2P16383 781 aaKnown RBP16.19■□□□□ 0.18
U2AF1-210ENST00000478282 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
U2AF1-210ENST00000478282 ALDH1B1P30837 517 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 DPY19L2P1Q6NXN4 242 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 ATP6V0A4Q9HBG4 840 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 BMP2KQ9NSY1 1161 aaPredicted RBP16.19■□□□□ 0.18
U2AF1-210ENST00000478282 UTP11Q9Y3A2 253 aaKnown RBP16.19■□□□□ 0.18
U2AF1-210ENST00000478282 PPFIA2O75334 1257 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 SCP2P22307 547 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 NBPF9Q3BBW0 867 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 SPDYCQ5MJ68 293 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 DNAAF5Q86Y56 855 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 CCDC65Q8IXS2 484 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 LMBR1Q8WVP7 490 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 NENFQ9UMX5 172 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 hCG_1984214I3L0E3 225 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 FLOT1O75955 427 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 ADAM9Q13443 819 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 E2F5Q15329 346 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 ZNF713Q8N859 430 aaPredicted RBP16.19■□□□□ 0.18
U2AF1-210ENST00000478282 CCDC197Q8NCU1 140 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 MDM1Q8TC05 714 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 SCFD1Q8WVM8 642 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 TXLNGYQ9BZA5 131 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 CELF4Q9BZC1 486 aaKnown RBP16.19■□□□□ 0.18
U2AF1-210ENST00000478282 DPH5Q9H2P9 285 aa16.19■□□□□ 0.18
U2AF1-210ENST00000478282 CCT8L1PA6NM43 557 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 UCHL3P15374 230 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 PRKCIP41743 596 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 ADCY7P51828 1080 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 ELF3P78545 371 aaPredicted RBP16.18■□□□□ 0.18
U2AF1-210ENST00000478282 KCTD19Q17RG1 926 aaPredicted RBP16.18■□□□□ 0.18
U2AF1-210ENST00000478282 A0A0A6YYK5 440 aaPredicted RBP16.18■□□□□ 0.18
U2AF1-210ENST00000478282 CTNND1O60716 968 aaKnown RBP16.18■□□□□ 0.18
U2AF1-210ENST00000478282 SLC9A1P19634 815 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 ANXA13P27216 316 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 TGFB2P61812 414 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 POU5F1Q01860 360 aaKnown RBP16.18■□□□□ 0.18
U2AF1-210ENST00000478282 HOOK3Q86VS8 718 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 SYCE1Q8N0S2 351 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 FMO2Q99518 471 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 HDAC9Q9UKV0 1011 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 PNMA2Q9UL42 364 aa16.18■□□□□ 0.18
U2AF1-210ENST00000478282 CETN3O15182 167 aa16.17■□□□□ 0.18
U2AF1-210ENST00000478282 EDRF1Q3B7T1 1238 aa16.17■□□□□ 0.18
U2AF1-210ENST00000478282 TLDC1Q6P9B6 456 aa16.17■□□□□ 0.18
U2AF1-210ENST00000478282 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
U2AF1-210ENST00000478282 SLC51AQ86UW1 340 aa16.17■□□□□ 0.18
U2AF1-210ENST00000478282 NT5DC3Q86UY8 548 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms