RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 KLHL30Q0D2K2 578 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 ARHGAP22Q7Z5H3 698 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 BLIDQ8IZY5 108 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 TTC8Q8TAM2 541 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 ZFAND2BQ8WV99 257 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 ESR2Q92731 530 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 RBM41Q96IZ5 413 aaKnown RBP10.68□□□□□ -0.7
COL13A1-207ENST00000478219 C7orf25Q9BPX7 421 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 ISCA1Q9BUE6 129 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 RNPEPL1Q9HAU8 725 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 NLRP2Q9NX02 1062 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 CEP72Q9P209 647 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 UTP11Q9Y3A2 253 aaKnown RBP10.68□□□□□ -0.7
COL13A1-207ENST00000478219 CES2O00748 559 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 PDE8BO95263 885 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 FGGP02679 453 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 MYL1P05976 194 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 CALB2P22676 271 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 PEX5P50542 639 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 MPP2Q14168 576 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 DIXDC1Q155Q3 683 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 ESCO1Q5FWF5 840 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 SOGA3Q5TF21 947 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 DCAF12L1Q5VU92 463 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 DENND2CQ68D51 928 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 ZNF571Q7Z3V5 609 aaPredicted RBP10.68□□□□□ -0.7
COL13A1-207ENST00000478219 EXOC3L1Q86VI1 746 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 KLHL23Q8NBE8 558 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 TPCN2Q8NHX9 752 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 GDAP1Q8TB36 358 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 NEK9Q8TD19 979 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 IFT43Q96FT9 208 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 DDX23Q9BUQ8 820 aaKnown RBP10.68□□□□□ -0.7
COL13A1-207ENST00000478219 NACAP1Q9BZK3 213 aa10.68□□□□□ -0.7
COL13A1-207ENST00000478219 BAZ2AQ9UIF9 1905 aaKnown RBP10.67□□□□□ -0.7
COL13A1-207ENST00000478219 MYMKA6NI61 221 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 GJB6O95452 261 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 ACTN1P12814 892 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 CCNB1P14635 433 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 SCNN1BP51168 640 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 AUHQ13825 339 aaKnown RBP10.67□□□□□ -0.7
COL13A1-207ENST00000478219 PFKFB3Q16875 520 aaPredicted RBP10.67□□□□□ -0.7
COL13A1-207ENST00000478219 ZC2HC1CQ53FD0 456 aaPredicted RBP10.67□□□□□ -0.7
COL13A1-207ENST00000478219 ECHDC2Q86YB7 292 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 MMTAG2Q9BU76 263 aaKnown RBP10.67□□□□□ -0.7
COL13A1-207ENST00000478219 TRIM4Q9C037 500 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 SLITRK6Q9H5Y7 841 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 RXFP1Q9HBX9 757 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 FAM114A2Q9NRY5 505 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 PRKAG3Q9UGI9 489 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 CCDC188H7C350 402 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 ENTPD5O75356 428 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 SUN1O94901 812 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 CNGA1P29973 690 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 PTDSS1P48651 473 aaKnown RBP10.67□□□□□ -0.7
COL13A1-207ENST00000478219 CABP4P57796 275 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 MRPS35P82673 323 aaKnown RBP10.67□□□□□ -0.7
COL13A1-207ENST00000478219 PPP2R5BQ15173 497 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 DUPD1Q68J44 220 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 AADACL2Q6P093 401 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 FAM47EQ6ZV65 393 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 IFNL2Q8IZJ0 200 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 RASGEF1CQ8N431 466 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 FAM13CQ8NE31 585 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 ATL2Q8NHH9 583 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 FAM136AQ96C01 138 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 NSRP1Q9H0G5 558 aaKnown RBP10.67□□□□□ -0.7
COL13A1-207ENST00000478219 RNF41Q9H4P4 317 aaPredicted RBP10.67□□□□□ -0.7
COL13A1-207ENST00000478219 PICK1Q9NRD5 415 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 STXBP5LQ9Y2K9 1186 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 MYH3P11055 1940 aa10.67□□□□□ -0.7
COL13A1-207ENST00000478219 CCDC88AQ3V6T2 1871 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 CCDC169A6NNP5 214 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 UNC5CO95185 931 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 GNAQP50148 359 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 LBRQ14739 615 aaKnown RBP10.66□□□□□ -0.7
COL13A1-207ENST00000478219 SGSM1Q2NKQ1 1148 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 FAM47AQ5JRC9 791 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 CNNM4Q6P4Q7 775 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 PEX26Q7Z412 305 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 ANKRD42Q8N9B4 389 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 FAM81AQ8TBF8 368 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 STK32AQ8WU08 396 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 DYDC1Q8WWB3 177 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 KIFAP3Q92845 792 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 IFT74Q96LB3 600 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 FGFBP2Q9BYJ0 223 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 PCDHA6Q9UN73 950 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 PCDHA8Q9Y5H6 950 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 TMEM120BA0PK00 339 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 M0R2N6 131 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 AFPP02771 609 aaKnown RBP10.66□□□□□ -0.7
COL13A1-207ENST00000478219 TARSP26639 723 aaKnown RBP10.66□□□□□ -0.7
COL13A1-207ENST00000478219 TECP42680 631 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 KLC1Q07866 573 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 ADCY1Q08828 1119 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 ZNF211Q13398 564 aaPredicted RBP10.66□□□□□ -0.7
COL13A1-207ENST00000478219 LONRF1Q17RB8 773 aa10.66□□□□□ -0.7
COL13A1-207ENST00000478219 TNFAIP8L3Q5GJ75 292 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms