RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 ITGAEP38570 1179 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 CRKP46108 304 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 PTH2RP49190 550 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 RABGGTBP53611 331 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 GRIN1Q05586 938 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 NAIF1Q69YI7 327 aaPredicted RBP3.31□□□□□ -1.88
CALD1-218ENST00000478075 UNC5AQ6ZN44 842 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 LARP4Q71RC2 724 aaKnown RBP eCLIP3.31□□□□□ -1.88
CALD1-218ENST00000478075 CCDC82Q8N4S0 544 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 CLDND1Q9NY35 253 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 FAM184BQ9ULE4 1060 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 ZNRF3Q9ULT6 936 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 LRP12Q9Y561 859 aa3.31□□□□□ -1.88
CALD1-218ENST00000478075 EPN1Q9Y6I3 576 aaPredicted RBP3.31□□□□□ -1.88
CALD1-218ENST00000478075 CENPVL1A0A0U1RR11 272 aa3.3□□□□□ -1.88
CALD1-218ENST00000478075 GUCY2CP25092 1073 aa3.3□□□□□ -1.88
CALD1-218ENST00000478075 PSMD2Q13200 908 aa3.3□□□□□ -1.88
CALD1-218ENST00000478075 USP43Q70EL4 1123 aa3.3□□□□□ -1.88
CALD1-218ENST00000478075 FILIP1Q7Z7B0 1213 aa3.3□□□□□ -1.88
CALD1-218ENST00000478075 KIAA0825Q8IV33 1275 aa3.3□□□□□ -1.88
CALD1-218ENST00000478075 ZNF296Q8WUU4 475 aaPredicted RBP3.3□□□□□ -1.88
CALD1-218ENST00000478075 AKT3Q9Y243 479 aa3.3□□□□□ -1.88
CALD1-218ENST00000478075 ARID3CA6NKF2 412 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 MEFVO15553 781 aaPredicted RBP3.29□□□□□ -1.88
CALD1-218ENST00000478075 EZH2Q15910 746 aaKnown RBP3.29□□□□□ -1.88
CALD1-218ENST00000478075 PTF1AQ7RTS3 328 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 OTOP2Q7RTS6 562 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 ARHGEF19Q8IW93 802 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 CMTR2Q8IYT2 770 aaKnown RBP3.29□□□□□ -1.88
CALD1-218ENST00000478075 NPLOC4Q8TAT6 608 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 CPT1CQ8TCG5 803 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 ATXN2LQ8WWM7 1075 aaKnown RBP3.29□□□□□ -1.88
CALD1-218ENST00000478075 CLEC4DQ8WXI8 215 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 NKD1Q969G9 470 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 PPP1R10Q96QC0 940 aaKnown RBP3.29□□□□□ -1.88
CALD1-218ENST00000478075 WDR11Q9BZH6 1224 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 KBTBD4Q9NVX7 518 aa3.29□□□□□ -1.88
CALD1-218ENST00000478075 CGB1A6NKQ9 187 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 GRXCR1A8MXD5 290 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 INSIG1O15503 277 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 KCNH1O95259 989 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 MATN4O95460 622 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 EPHX1P07099 455 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 OCA2Q04671 838 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 PDE4CQ08493 712 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 HYAL1Q12794 435 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 TUSC3Q13454 348 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 GNPTABQ3T906 1256 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 MIDNQ504T8 468 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 FAM111BQ6SJ93 734 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 SLC46A2Q9BY10 475 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 PHAXQ9H814 394 aaKnown RBP3.28□□□□□ -1.88
CALD1-218ENST00000478075 KIAA1586Q9HCI6 787 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 SEMA4GQ9NTN9 838 aa3.28□□□□□ -1.88
CALD1-218ENST00000478075 A0A0G2JNJ9 132 aa3.27□□□□□ -1.89
CALD1-218ENST00000478075 NOP56O00567 594 aaKnown RBP3.27□□□□□ -1.89
CALD1-218ENST00000478075 SLC27A2O14975 620 aa3.27□□□□□ -1.89
CALD1-218ENST00000478075 TESK1Q15569 626 aa3.27□□□□□ -1.89
CALD1-218ENST00000478075 DCAF17Q5H9S7 520 aaPredicted RBP3.27□□□□□ -1.89
CALD1-218ENST00000478075 ACBD5Q5T8D3 534 aaPredicted RBP3.27□□□□□ -1.89
CALD1-218ENST00000478075 IQSEC1Q6DN90 963 aa3.27□□□□□ -1.89
CALD1-218ENST00000478075 SH2D3CQ8N5H7 860 aa3.27□□□□□ -1.89
CALD1-218ENST00000478075 WDR48Q8TAF3 677 aa3.27□□□□□ -1.89
CALD1-218ENST00000478075 FGD4Q96M96 766 aa3.27□□□□□ -1.89
CALD1-218ENST00000478075 Q9UFV3 132 aa3.27□□□□□ -1.89
CALD1-218ENST00000478075 SORCS3Q9UPU3 1222 aa3.27□□□□□ -1.89
CALD1-218ENST00000478075 GNEQ9Y223 722 aaKnown RBP3.27□□□□□ -1.89
CALD1-218ENST00000478075 TMEM200CA6NKL6 621 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 ESRRBO95718 433 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 SNHG28P0DPA3 235 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 NAT2P11245 290 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 LTBRP36941 435 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 SLC7A5Q01650 507 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 DDB1Q16531 1140 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 SRSF7Q16629 238 aaKnown RBP eCLIP3.26□□□□□ -1.89
CALD1-218ENST00000478075 UBP1Q9NZI7 540 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 EMC9Q9Y3B6 208 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 PCDHA2Q9Y5H9 948 aa3.26□□□□□ -1.89
CALD1-218ENST00000478075 SCAF4O95104 1147 aaKnown RBP3.25□□□□□ -1.89
CALD1-218ENST00000478075 POLGP54098 1239 aaPredicted RBP3.25□□□□□ -1.89
CALD1-218ENST00000478075 SESN2P58004 480 aaPredicted RBP3.25□□□□□ -1.89
CALD1-218ENST00000478075 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.25□□□□□ -1.89
CALD1-218ENST00000478075 RCBTB1Q8NDN9 531 aa3.25□□□□□ -1.89
CALD1-218ENST00000478075 MDGA1Q8NFP4 955 aa3.25□□□□□ -1.89
CALD1-218ENST00000478075 NKX2-4Q9H2Z4 354 aa3.25□□□□□ -1.89
CALD1-218ENST00000478075 ARHGAP28Q9P2N2 729 aa3.25□□□□□ -1.89
CALD1-218ENST00000478075 VWA7Q9Y334 891 aa3.25□□□□□ -1.89
CALD1-218ENST00000478075 ARHGEF17Q96PE2 2063 aaPredicted RBP3.24□□□□□ -1.89
CALD1-218ENST00000478075 ZNF804BA4D1E1 1349 aa3.24□□□□□ -1.89
CALD1-218ENST00000478075 GAGE12BA1L429 117 aa3.24□□□□□ -1.89
CALD1-218ENST00000478075 GAGE12HA6NDE8 117 aa3.24□□□□□ -1.89
CALD1-218ENST00000478075 ITGAVP06756 1048 aa3.24□□□□□ -1.89
CALD1-218ENST00000478075 CTSHP09668 335 aa3.24□□□□□ -1.89
CALD1-218ENST00000478075 DBPQ10586 325 aaPredicted RBP3.24□□□□□ -1.89
CALD1-218ENST00000478075 MPP3Q13368 585 aa3.24□□□□□ -1.89
CALD1-218ENST00000478075 ZYXQ15942 572 aaKnown RBP3.24□□□□□ -1.89
CALD1-218ENST00000478075 ABHD17BQ5VST6 288 aa3.24□□□□□ -1.89
CALD1-218ENST00000478075 ERMP1Q7Z2K6 904 aa3.24□□□□□ -1.89
CALD1-218ENST00000478075 RBBP8NLQ8NC74 664 aaPredicted RBP3.24□□□□□ -1.89
CALD1-218ENST00000478075 BVESQ8NE79 360 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms