RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 GADL1Q6ZQY3 521 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 LINC01465Q8N7H1 131 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 BAP1Q92560 729 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 DDX41Q9UJV9 622 aaKnown RBP13.44□□□□□ -0.26
PRPF39-203ENST00000477626 SPAG1Q07617 926 aa13.44□□□□□ -0.26
PRPF39-203ENST00000477626 NOLC1Q14978 699 aaKnown RBP eCLIP13.44□□□□□ -0.265e-32■■■■■ 47.5
PRPF39-203ENST00000477626 KNOP1Q1ED39 458 aaKnown RBP13.44□□□□□ -0.26
PRPF39-203ENST00000477626 IGKV6-21A0A0C4DH24 114 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 SUPT20HL2P0C7V6 817 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 CYP2C8P10632 490 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 KLK7P49862 253 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 ACTR2P61160 394 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 NSMFQ6X4W1 530 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 CCDC65Q8IXS2 484 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 GBA2Q9HCG7 927 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-203ENST00000477626 JPH1Q9HDC5 661 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-203ENST00000477626 CAPN11Q9UMQ6 739 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 ZNF76P36508 570 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 GTF2A2P52657 109 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 MORN1Q5T089 497 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 SLC39A4Q6P5W5 647 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 TRIM65Q6PJ69 517 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 TPH2Q8IWU9 490 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 CSGALNACT2Q8N6G5 542 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 CDK5RAP3Q96JB5 506 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 HIP1RO75146 1068 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 TGFB3P10600 412 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 MIER3Q7Z3K6 550 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 CCAR2Q8N163 923 aaKnown RBP13.43□□□□□ -0.26
PRPF39-203ENST00000477626 TUBGCP2Q9BSJ2 902 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 DHX33Q9H6R0 707 aaKnown RBP13.43□□□□□ -0.26
PRPF39-203ENST00000477626 TAB2Q9NYJ8 693 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 REXO2Q9Y3B8 237 aaKnown RBP13.43□□□□□ -0.26
PRPF39-203ENST00000477626 PCDHA10Q9Y5I2 948 aa13.43□□□□□ -0.26
PRPF39-203ENST00000477626 PDHXO00330 501 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 CHMP2AO43633 222 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 ASTE1Q2TB18 679 aaPredicted RBP13.42□□□□□ -0.26
PRPF39-203ENST00000477626 NAA15Q9BXJ9 866 aaKnown RBP13.42□□□□□ -0.26
PRPF39-203ENST00000477626 SLC16A3O15427 465 aaKnown RBP13.42□□□□□ -0.26
PRPF39-203ENST00000477626 ADCY6O43306 1168 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 LCA5LO95447 670 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 CETPP11597 493 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 CDK17Q00537 523 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 ZRSR1Q15695 479 aaKnown RBP13.42□□□□□ -0.26
PRPF39-203ENST00000477626 VWA3BQ502W6 1294 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 PADI6Q6TGC4 694 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 EMSYQ7Z589 1322 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 FAM189A1O60320 539 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 AKAP3O75969 853 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 NF2P35240 595 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 TPM4P67936 248 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
PRPF39-203ENST00000477626 MYBPC2Q14324 1141 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 TMEM161BQ8NDZ6 487 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 LMO3Q8TAP4 145 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 CDHR1Q96JP9 859 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 ABHD10Q9NUJ1 306 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 TYW1Q9NV66 732 aaKnown RBP13.42□□□□□ -0.26
PRPF39-203ENST00000477626 SLC9A2Q9UBY0 812 aa13.42□□□□□ -0.26
PRPF39-203ENST00000477626 DIS3Q9Y2L1 958 aaKnown RBP13.42□□□□□ -0.26
PRPF39-203ENST00000477626 IGF2BP3O00425 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRPF39-203ENST00000477626 SERPINC1P01008 464 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 EDN1P05305 212 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 PLS3P13797 630 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 ADSSP30520 456 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 STXBP2Q15833 593 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 GPR20Q99678 358 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 GANQ9H2C0 597 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 STYXL1Q9Y6J8 313 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 GOLGA6L6A8MZA4 724 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-203ENST00000477626 CTGFP29279 349 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 NMT1P30419 496 aaKnown RBP13.41□□□□□ -0.26
PRPF39-203ENST00000477626 ARL2P36404 184 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 IRF5Q13568 498 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 ZC2HC1CQ53FD0 456 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-203ENST00000477626 RAD9BQ6WBX8 426 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 ZNF662Q6ZS27 426 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 SAPCD2Q86UD0 394 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 TRIM44Q96DX7 344 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-203ENST00000477626 FBXL18Q96ME1 805 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 PARVGQ9HBI0 331 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 ARHGAP28Q9P2N2 729 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 COL4A3BPQ9Y5P4 624 aa13.41□□□□□ -0.26
PRPF39-203ENST00000477626 B4DLN1 442 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 STX10O60499 249 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 FKBP3Q00688 224 aaKnown RBP13.4□□□□□ -0.26
PRPF39-203ENST00000477626 DHX8Q14562 1220 aaKnown RBP13.4□□□□□ -0.26
PRPF39-203ENST00000477626 NLRX1Q86UT6 975 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 SPIRE2Q8WWL2 714 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 PGK2P07205 417 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 MYCLP12524 364 aaPredicted RBP13.4□□□□□ -0.26
PRPF39-203ENST00000477626 OSBPP22059 807 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 CELF3Q5SZQ8 465 aaKnown RBP13.4□□□□□ -0.26
PRPF39-203ENST00000477626 FRMD5Q7Z6J6 570 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 PLEKHO2Q8TD55 490 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 GPR88Q9GZN0 384 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 CCDC113Q9H0I3 377 aa13.4□□□□□ -0.26
PRPF39-203ENST00000477626 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms