RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
COL4A5-204ENST00000477429 TLE6Q9H808 572 aa11.25□□□□□ -0.61
COL4A5-204ENST00000477429 HIDE1A8MVS5 230 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 STAM2O75886 525 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 PLEKHA8P1O95397 391 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 SCG2P13521 617 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 PBX3P40426 434 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 PLCB4Q15147 1175 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 DUSP6Q16828 381 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 KANK3Q6NY19 840 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 SMC5Q8IY18 1101 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 TMEM105Q8N8V8 129 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 CYP2W1Q8TAV3 490 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 SEPT1Q8WYJ6 367 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 OSBPL3Q9H4L5 887 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 CWH43Q9H720 699 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 DIAPH3Q9NSV4 1193 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 NOC2LQ9Y3T9 749 aaKnown RBP11.24□□□□□ -0.61
COL4A5-204ENST00000477429 TRPV2Q9Y5S1 764 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 UBIAD1Q9Y5Z9 338 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 IGSF9BQ9UPX0 1349 aa11.24□□□□□ -0.61
COL4A5-204ENST00000477429 LOXHD1Q8IVV2 1947 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 IFIT3O14879 490 aaKnown RBP11.23□□□□□ -0.61
COL4A5-204ENST00000477429 FGF18O76093 207 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 BRD1O95696 1058 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 WEE2P0C1S8 567 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 FGFR1P11362 822 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 MFAP1P55081 439 aaKnown RBP11.23□□□□□ -0.61
COL4A5-204ENST00000477429 NAALADL2Q58DX5 795 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 LLGL2Q6P1M3 1020 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 LRRC55Q6ZSA7 311 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 COLGALT1Q8NBJ5 622 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 SMARCC2Q8TAQ2 1214 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 IGDCC4Q8TDY8 1250 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 GLG1Q92896 1179 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 PPP1R16BQ96T49 567 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 CELF4Q9BZC1 486 aaKnown RBP11.23□□□□□ -0.61
COL4A5-204ENST00000477429 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 ERVK-5Q9HDB9 667 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 RNF19AQ9NV58 838 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 TYW1Q9NV66 732 aaKnown RBP11.23□□□□□ -0.61
COL4A5-204ENST00000477429 ERAP1Q9NZ08 941 aa11.23□□□□□ -0.61
COL4A5-204ENST00000477429 FRYQ5TBA9 3013 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 TBKBP1A7MCY6 615 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 PIK3CDO00329 1044 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 ATF7P17544 494 aaPredicted RBP11.22□□□□□ -0.61
COL4A5-204ENST00000477429 RXRAP19793 462 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 TECP42680 631 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 NT5C2P49902 561 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 ITGB3BPQ13352 177 aaPredicted RBP11.22□□□□□ -0.61
COL4A5-204ENST00000477429 PUM1Q14671 1186 aaKnown RBP eCLIP11.22□□□□□ -0.61
COL4A5-204ENST00000477429 PLPP4Q5VZY2 271 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 ANKRD54Q6NXT1 300 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 CHD1LQ86WJ1 897 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 SRBD1Q8N5C6 995 aaKnown RBP11.22□□□□□ -0.61
COL4A5-204ENST00000477429 MICAL1Q8TDZ2 1067 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 GPRASP2Q96D09 838 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 IRF2BPLQ9H1B7 796 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 PCDHA2Q9Y5H9 948 aa11.22□□□□□ -0.61
COL4A5-204ENST00000477429 FNDC1Q4ZHG4 1894 aaPredicted RBP11.21□□□□□ -0.61
COL4A5-204ENST00000477429 ZBTB42B2RXF5 422 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 C2CD4DB7Z1M9 353 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 C9IYK1 514 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 E7EWF7 191 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.61
COL4A5-204ENST00000477429 ADAMTS3O15072 1205 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 ASGR2P07307 311 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 GSPT1P15170 499 aaKnown RBP11.21□□□□□ -0.61
COL4A5-204ENST00000477429 PDE4AP27815 886 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 SARSP49591 514 aaKnown RBP11.21□□□□□ -0.61
COL4A5-204ENST00000477429 NUCB1Q02818 461 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 NFX1Q12986 1120 aaKnown RBP11.21□□□□□ -0.61
COL4A5-204ENST00000477429 PAK2Q13177 524 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 PKN1Q16512 942 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 MTHFD1LQ6UB35 978 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 RSPH3Q86UC2 560 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 NLRX1Q86UT6 975 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 MB21D2Q8IYB1 491 aaPredicted RBP11.21□□□□□ -0.61
COL4A5-204ENST00000477429 KREMEN2Q8NCW0 462 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 PGBD1Q96JS3 809 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 ADAM2Q99965 735 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 SMARCAD1Q9H4L7 1026 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 POMKQ9H5K3 350 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 LY9Q9HBG7 655 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 TMEM260Q9NX78 707 aa11.21□□□□□ -0.61
COL4A5-204ENST00000477429 KAT6AQ92794 2004 aa11.21□□□□□ -0.62
COL4A5-204ENST00000477429 HELZ2Q9BYK8 2649 aaKnown RBP11.21□□□□□ -0.62
COL4A5-204ENST00000477429 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-204ENST00000477429 CCNE2O96020 404 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 STAG3L1P0CL83 205 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 ATP4AP20648 1035 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 ACTR2P61160 394 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 KRT76Q01546 638 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 MTMR1Q13613 665 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 WTAPQ15007 396 aa11.2□□□□□ -0.62
COL4A5-204ENST00000477429 IER5Q5VY09 327 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms