RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 KCTD19Q17RG1 926 aaPredicted RBP11.97□□□□□ -0.49
COL27A1-204ENST00000477421 ZNF394Q53GI3 561 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 DENND2CQ68D51 928 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 CIAPIN1Q6FI81 312 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 NT5C1BQ96P26 610 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 IWS1Q96ST2 819 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 VGLL3A8MV65 326 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 KLRC1P26715 233 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 SSTR3P32745 418 aaPredicted RBP11.97□□□□□ -0.49
COL27A1-204ENST00000477421 PRELPP51888 382 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 PDCLQ13371 301 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 NNTQ13423 1086 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 SHROOM1Q2M3G4 852 aaPredicted RBP11.97□□□□□ -0.49
COL27A1-204ENST00000477421 ACCSQ96QU6 501 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 RAB17Q9H0T7 212 aa11.97□□□□□ -0.49
COL27A1-204ENST00000477421 TYW1Q9NV66 732 aaKnown RBP11.97□□□□□ -0.49
COL27A1-204ENST00000477421 ANO9A1A5B4 782 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 MARK3P27448 753 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 TTC31Q49AM3 519 aaPredicted RBP11.96□□□□□ -0.49
COL27A1-204ENST00000477421 HHIPL2Q6UWX4 724 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 GADL1Q6ZQY3 521 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.96□□□□□ -0.49
COL27A1-204ENST00000477421 FAM208AQ9UK61 1670 aaKnown RBP11.96□□□□□ -0.49
COL27A1-204ENST00000477421 TBC1D8O95759 1140 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 UCHL3P15374 230 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 CYP11B2P19099 503 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 PLA2G4AP47712 749 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 TBX2Q13207 712 aaPredicted RBP11.96□□□□□ -0.49
COL27A1-204ENST00000477421 LIN9Q5TKA1 542 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 LMBRD2Q68DH5 695 aaPredicted RBP11.96□□□□□ -0.49
COL27A1-204ENST00000477421 PPP1R18Q6NYC8 613 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 RNF207Q6ZRF8 634 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 EXOC4Q96A65 974 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 MTRQ99707 1265 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 DUSP9Q99956 384 aaKnown RBP11.96□□□□□ -0.49
COL27A1-204ENST00000477421 DAAM1Q9Y4D1 1078 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 ZHX2Q9Y6X8 837 aa11.96□□□□□ -0.49
COL27A1-204ENST00000477421 NALCNQ8IZF0 1738 aa11.96□□□□□ -0.5
COL27A1-204ENST00000477421 A0A087X0T9 212 aa11.96□□□□□ -0.5
COL27A1-204ENST00000477421 RGS16O15492 202 aaPredicted RBP11.96□□□□□ -0.5
COL27A1-204ENST00000477421 FAM228BP0C875 321 aa11.96□□□□□ -0.5
COL27A1-204ENST00000477421 H2AFXP16104 143 aaPredicted RBP11.96□□□□□ -0.5
COL27A1-204ENST00000477421 CASP4P49662 377 aa11.96□□□□□ -0.5
COL27A1-204ENST00000477421 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.5
COL27A1-204ENST00000477421 SH3RF1Q7Z6J0 888 aa11.96□□□□□ -0.5
COL27A1-204ENST00000477421 AGBL1Q96MI9 1066 aa11.96□□□□□ -0.5
COL27A1-204ENST00000477421 MYO1FO00160 1098 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 DKC1O60832 514 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL27A1-204ENST00000477421 CD58P19256 250 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 ADCY8P40145 1251 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 FXR2P51116 673 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL27A1-204ENST00000477421 RHBDL3P58872 404 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 RASA3Q14644 834 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 DAGLBQ8NCG7 672 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 MPHOSPH6Q99547 160 aaKnown RBP11.95□□□□□ -0.5
COL27A1-204ENST00000477421 NYAP2Q9P242 653 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 PLAGL2Q9UPG8 496 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 TRPC6Q9Y210 931 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 SNX24Q9Y343 169 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 FAM237AA0A1B0GTK4 181 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 HIP1RO75146 1068 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 SHMT1P34896 483 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 NF2P35240 595 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 CYFIP1Q7L576 1253 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 RIOX1Q9H6W3 641 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 ARHGAP20Q9P2F6 1191 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 AMACRQ9UHK6 382 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 NEBLO76041 1014 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 NSFP46459 744 aaKnown RBP11.95□□□□□ -0.5
COL27A1-204ENST00000477421 EZH2Q15910 746 aaKnown RBP11.95□□□□□ -0.5
COL27A1-204ENST00000477421 DCAF15Q66K64 600 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 ZBTB33Q86T24 672 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 FAM160B2Q86V87 743 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 SH2D3CQ8N5H7 860 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 ANKS4BQ8N8V4 417 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 GPATCH11Q8N954 259 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 SLC7A3Q8WY07 619 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 WRNIP1Q96S55 665 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 RBM12Q9NTZ6 932 aaKnown RBP11.95□□□□□ -0.5
COL27A1-204ENST00000477421 SAMD15Q9P1V8 674 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 SUGT1Q9Y2Z0 365 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 RGPD2P0DJD1 1756 aa11.95□□□□□ -0.5
COL27A1-204ENST00000477421 ESYT2A0FGR8 921 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 ATP2A1O14983 1001 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 HERVK_113P62684 666 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 PTK2Q05397 1052 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 PASD1Q8IV76 773 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 CERS5Q8N5B7 392 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.94□□□□□ -0.5
COL27A1-204ENST00000477421 ATP6V0A1Q93050 837 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 ZBTB39O15060 712 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 PIK3CAP42336 1068 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 NPEPPSP55786 919 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 CENPPQ6IPU0 288 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 EMSYQ7Z589 1322 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 AMIGO3Q86WK7 504 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 PNMA5Q96PV4 448 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 ERGIC2Q96RQ1 377 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 PACSIN1Q9BY11 444 aa11.94□□□□□ -0.5
COL27A1-204ENST00000477421 GOLGA8KD6RF30 607 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms