RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 BECN1Q14457 450 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 PDIA5Q14554 519 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 TTC38Q5R3I4 469 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 LARP1BQ659C4 914 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 RUFY4Q6ZNE9 571 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 TSHZ1Q6ZSZ6 1077 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 OTUD6AQ7L8S5 288 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 BRAPQ7Z569 592 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 DEFB128Q7Z7B8 93 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 KIAA0319LQ8IZA0 1049 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 LINC01465Q8N7H1 131 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 DNAJB3Q8WWF6 145 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 FTHL17Q9BXU8 183 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 CELF4Q9BZC1 486 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 PCDHA11Q9Y5I1 949 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 TRPV2Q9Y5S1 764 aa13.87□□□□□ -0.19
CLCNKA-205ENST00000477360 EML1O00423 815 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 SLC34A2O95436 690 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 BMP15O95972 392 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 ATP2A2P16615 1042 aaKnown RBP13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 RFC5P40937 340 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 IGBP1P78318 339 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 TBC1D8BQ0IIM8 1120 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 FBXO47Q5MNV8 452 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 MAP7D2Q96T17 732 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 RAB34Q9BZG1 259 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 ANKEF1Q9NU02 776 aa13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 CXXC1Q9P0U4 656 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 DAXXQ9UER7 740 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-205ENST00000477360 KIF28PB7ZC32 967 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 MAFO75444 373 aaPredicted RBP13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 SLITRK3O94933 977 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 MCM7P33993 719 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 DNM2P50570 870 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 CRYBB1P53674 252 aaPredicted RBP13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 UGCGQ16739 394 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 TMEM266Q2M3C6 531 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 ANO5Q75V66 913 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 C4orf32Q8N8J7 132 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 DBF4BQ8NFT6 615 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 ERMNQ8TAM6 284 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 GJA10Q969M2 543 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 LRCH3Q96II8 777 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 CEP89Q96ST8 783 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 LXNQ9BS40 222 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 POLR3CQ9BUI4 534 aaPredicted RBP13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 IFIH1Q9BYX4 1025 aaKnown RBP13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 TUFT1Q9NNX1 390 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 MSRAQ9UJ68 235 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 CDY2AQ9Y6F7 541 aa13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 TRIP12Q14669 1992 aaPredicted RBP13.85□□□□□ -0.19
CLCNKA-205ENST00000477360 MYH9P35579 1960 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 SLC26A4O43511 780 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 AMHP03971 560 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 CTSHP09668 335 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 DNAJB2P25686 324 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 YWHABP31946 246 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 ANP32AP39687 249 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 TXKP42681 527 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 TOB1P50616 345 aaPredicted RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 FOSBP53539 338 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 WDR5P61964 334 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 LPIN1Q14693 890 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 ZNF697Q5TEC3 545 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 ARL6IP4Q66PJ3 421 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 HAUS3Q68CZ6 603 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 HERC6Q8IVU3 1022 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 TRAPPC12Q8WVT3 735 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 SLC7A3Q8WY07 619 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 UIMC1Q96RL1 719 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 EIF2AK1Q9BQI3 630 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 FAM49AQ9H0Q0 323 aaPredicted RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-205ENST00000477360 ZBBXA8MT70 800 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 WNT7AO00755 349 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 RPA1P27694 616 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 PCBP1Q15365 356 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 ZNF174Q15697 407 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 NCAPH2Q6IBW4 605 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 EFCAB12Q6NXP0 572 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 METTL13Q8N6R0 699 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 IGSF22Q8N9C0 903 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 BANK1Q8NDB2 785 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 TIFAQ96CG3 184 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 PBX4Q9BYU1 374 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 TMEM60Q9H2L4 133 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 DHX33Q9H6R0 707 aaKnown RBP13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 PCDH10Q9P2E7 1040 aa13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 SEPT9Q9UHD8 586 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 MORC2Q9Y6X9 1032 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-205ENST00000477360 COL4A6Q14031 1691 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 DDX11L8A8MPP1 907 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 GPR182O15218 404 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 ASAP2O43150 1006 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms