RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 FOXP4Q8IVH2 680 aaPredicted RBP17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 SP8Q8IXZ3 490 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 ZNRF3Q9ULT6 936 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 GMNCA6NCL1 334 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 GIPC1O14908 333 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 ZBTB5O15062 677 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 ASNSP08243 561 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 SESN3P58005 492 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 SEPT14Q6ZU15 432 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 TUBB6Q9BUF5 446 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 PHF20Q9BVI0 1012 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 TDRD3Q9H7E2 651 aaKnown RBP17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 NRBP2Q9NSY0 501 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 HESX1Q9UBX0 185 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 SNX24Q9Y343 169 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 SALL3Q9BXA9 1300 aa17.4■□□□□ 0.38
HNRNPU-209ENST00000476241 KIAA1210Q9ULL0 1709 aa17.39■□□□□ 0.38
HNRNPU-209ENST00000476241 TMOD1P28289 359 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 RFX5P48382 616 aaPredicted RBP17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 UBXN2AP68543 259 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 LLGL1Q15334 1064 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 TMED2Q15363 201 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 RAD9BQ6WBX8 426 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 H7C0C1 242 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 NR3C1P04150 777 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 ATP5OP48047 213 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 PSMD6Q15008 389 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 NUGGCQ68CJ6 796 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 APOBEC3FQ8IUX4 373 aaKnown RBP17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.39■□□□□ 0.378e-11■■■■■ 32.1
HNRNPU-209ENST00000476241 MMEP08473 750 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 STAT2P52630 851 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 YARSP54577 528 aaKnown RBP17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 ARHGAP4P98171 946 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 TRIM9Q9C026 710 aa17.39■□□□□ 0.37
HNRNPU-209ENST00000476241 EXOC1LA0A1B0GW35 172 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 SEPT6Q14141 434 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 SCYL3Q8IZE3 742 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 CDKL2Q92772 493 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 FAM20AQ96MK3 541 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 SRGNP10124 158 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 ZNF710Q8N1W2 664 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 ATP6V1G3Q96LB4 118 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 WRNIP1Q96S55 665 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 ELAC2Q9BQ52 826 aaKnown RBP17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 USH1CQ9Y6N9 552 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 ESYT3A0FGR9 886 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 USP17L5A8MUK1 530 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 MSH2P43246 934 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 TTBK2Q6IQ55 1244 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 RINT1Q6NUQ1 792 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 SFR1Q86XK3 245 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 MMS19Q96T76 1030 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.38■□□□□ 0.376e-10■■■□□ 17.3
HNRNPU-209ENST00000476241 SLITRK6Q9H5Y7 841 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 IQGAP1P46940 1657 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 NCK2O43639 380 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 DPEP1P16444 411 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 CACNB3P54284 484 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 ADCY1Q08828 1119 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 NAALADL2Q58DX5 795 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 ANKRD40Q6AI12 368 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 PDXDC1Q6P996 788 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 HACE1Q8IYU2 909 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 SRBD1Q8N5C6 995 aaKnown RBP17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 TBK1Q9UHD2 729 aa17.38■□□□□ 0.37
HNRNPU-209ENST00000476241 KNOP1Q1ED39 458 aaKnown RBP17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 TRIM50Q86XT4 487 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 SLC7A3Q8WY07 619 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 CPVLQ9H3G5 476 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 ANKFY1Q9P2R3 1169 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 MAD1L1Q9Y6D9 718 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 PPP2R2AP63151 447 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 PSD3Q9NYI0 1048 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 HACL1Q9UJ83 578 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 CEP152O94986 1710 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 CEMIPQ8WUJ3 1361 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 E9PMD0 336 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 CRKP46108 304 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 MAP7Q14244 749 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 PDZD4Q76G19 769 aaPredicted RBP17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 SRLQ86TD4 932 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 Q9H521 79 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 MAGOHP61326 146 aaKnown RBP17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 USP49Q70CQ1 688 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 TAB3Q8N5C8 712 aaPredicted RBP17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 RNF169Q8NCN4 708 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 CEP170P1Q96L14 293 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 SUGCTQ9HAC7 445 aa17.37■□□□□ 0.37
HNRNPU-209ENST00000476241 SSU72P8A0A1W2PR75 194 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 RHOBTB3O94955 611 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 CA4P22748 312 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 MRPS9P82933 396 aaKnown RBP17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 HNRNPLLQ8WVV9 542 aaKnown RBP17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 DDX47Q9H0S4 455 aaKnown RBP17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 MROH7-TTC4A0A0A0MT08 1334 aa17.36■□□□□ 0.37
HNRNPU-209ENST00000476241 ACSL3O95573 720 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms