RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 MSH4O15457 936 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 LPXNO60711 386 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 CHRNA1P02708 482 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 GHRP10912 638 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 SFNP31947 248 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 JAK3P52333 1124 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 GRB10Q13322 594 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 NPY5RQ15761 445 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 ZNF484Q5JVG2 852 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 LRCH2Q5VUJ6 765 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 IER5Q5VY09 327 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 SWSAP1Q6NVH7 229 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 MTHFD1LQ6UB35 978 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 SPRED2Q7Z698 418 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 TMCO2Q7Z6W1 182 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 MYOCDQ8IZQ8 938 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 TRAPPC12Q8WVT3 735 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 SLC5A5Q92911 643 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 FAM167AQ96KS9 214 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 RIT2Q99578 217 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 RAD9AQ99638 391 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 PCDHA2Q9Y5H9 948 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 MAFBQ9Y5Q3 323 aaPredicted RBP12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 CDY2AQ9Y6F7 541 aa12.87□□□□□ -0.35
NUDCD3-206ENST00000475952 CYP3A7-CYP3A51PA0A087WV96 503 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 PRR33A8MZF0 331 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 CHMP2AO43633 222 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 LARGE1O95461 756 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 CTDNEP1O95476 244 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 TDP2O95551 362 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 CYP3A7P24462 503 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 MRE11P49959 708 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 INF2Q27J81 1249 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 FAM117BQ6P1L5 589 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 TSHZ1Q6ZSZ6 1077 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 NECAB1Q8N987 351 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 NAP1L4Q99733 375 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 DISC1Q9NRI5 854 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 DDX25Q9UHL0 483 aaKnown RBP12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 TRPV2Q9Y5S1 764 aa12.86□□□□□ -0.35
NUDCD3-206ENST00000475952 LCHNA4D1U4 455 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 EDIL3O43854 480 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 GCFC2P16383 781 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 KRT2P35908 639 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 LPIN1Q14693 890 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 LETM2Q2VYF4 491 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 C8orf34Q49A92 452 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 FBXO47Q5MNV8 452 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 NME8Q8N427 588 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 NSUN7Q8NE18 718 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 RDM1Q8NG50 284 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 ZBTB10Q96DT7 871 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 MBOAT7Q96N66 472 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 INSL6Q9Y581 213 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 SQORQ9Y6N5 450 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 KDM3AQ9Y4C1 1321 aa12.85□□□□□ -0.35
NUDCD3-206ENST00000475952 MYO15AQ9UKN7 3530 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 PSMD10O75832 226 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 OATP04181 439 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 ATP4AP20648 1035 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 KLRC1P26715 233 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 TMEM62Q0P6H9 643 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 TRIM29Q14134 588 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 PIK3AP1Q6ZUJ8 805 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 MIER3Q7Z3K6 550 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 TOP1MTQ969P6 601 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 SNX27Q96L92 541 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 YME1L1Q96TA2 773 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 FTHL17Q9BXU8 183 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 OSBPL7Q9BZF2 842 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 UNC45AQ9H3U1 944 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 GJB4Q9NTQ9 266 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 PLXNA4Q9HCM2 1894 aa12.84□□□□□ -0.35
NUDCD3-206ENST00000475952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 ZBTB42B2RXF5 422 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 MAGEB2O15479 319 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 CCNT1O60563 726 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 UPP2O95045 317 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 FDPSP14324 419 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 HTRA4P83105 476 aaPredicted RBP12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 PRKCEQ02156 737 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 NHLH1Q02575 133 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 PAK2Q13177 524 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 PPP4R3AQ6IN85 833 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 ETNPPLQ8TBG4 499 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 GDPD5Q8WTR4 605 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 GJA10Q969M2 543 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 TGS1Q96RS0 853 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 CELF4Q9BZC1 486 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
NUDCD3-206ENST00000475952 MYO7AQ13402 2215 aa12.82□□□□□ -0.36
NUDCD3-206ENST00000475952 MYH11P35749 1972 aa12.82□□□□□ -0.36
NUDCD3-206ENST00000475952 LINC01553A4QN01 128 aa12.82□□□□□ -0.36
NUDCD3-206ENST00000475952 SLC37A4O43826 429 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms