RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 ZC3H3Q8IXZ2 948 aaKnown RBP19.29■□□□□ 0.68
CCM2-207ENST00000475551 SPAG5Q96R06 1193 aa19.29■□□□□ 0.68
CCM2-207ENST00000475551 FAM26FQ5R3K3 315 aa19.29■□□□□ 0.68
CCM2-207ENST00000475551 BZW1Q7L1Q6 419 aaKnown RBP19.29■□□□□ 0.68
CCM2-207ENST00000475551 NT5DC3Q86UY8 548 aa19.29■□□□□ 0.68
CCM2-207ENST00000475551 AGAP11Q8TF27 550 aa19.29■□□□□ 0.68
CCM2-207ENST00000475551 HES6Q96HZ4 224 aa19.29■□□□□ 0.68
CCM2-207ENST00000475551 SELENOSQ9BQE4 189 aa19.29■□□□□ 0.68
CCM2-207ENST00000475551 PABPC3Q9H361 631 aaKnown RBP19.29■□□□□ 0.68
CCM2-207ENST00000475551 COL5A3P25940 1745 aaPredicted RBP19.29■□□□□ 0.68
CCM2-207ENST00000475551 FLOT1O75955 427 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 SHBGP04278 402 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 NQO1P15559 274 aaKnown RBP19.28■□□□□ 0.68
CCM2-207ENST00000475551 PRKCIP41743 596 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 CCNHP51946 323 aaPredicted RBP19.28■□□□□ 0.68
CCM2-207ENST00000475551 PPP2R5EQ16537 467 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 KRT79Q5XKE5 535 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 INTS5Q6P9B9 1019 aaKnown RBP19.28■□□□□ 0.68
CCM2-207ENST00000475551 ARMC2Q8NEN0 867 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 FAM84BQ96KN1 310 aaPredicted RBP19.28■□□□□ 0.68
CCM2-207ENST00000475551 NSRP1Q9H0G5 558 aaKnown RBP19.28■□□□□ 0.68
CCM2-207ENST00000475551 ZDHHC18Q9NUE0 388 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 INTUQ9ULD6 942 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 L3MBTL1Q9Y468 752 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 PLSCR1O15162 318 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 EPS15P42566 896 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 PARP10Q53GL7 1025 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 DPY19L2P1Q6NXN4 242 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 KCNK18Q7Z418 384 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 CROCCP2Q86T23 111 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 NEK9Q8TD19 979 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 SNX29Q8TEQ0 813 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 ELAC2Q9BQ52 826 aaKnown RBP19.28■□□□□ 0.68
CCM2-207ENST00000475551 INTS9Q9NV88 658 aaKnown RBP19.28■□□□□ 0.68
CCM2-207ENST00000475551 PANK4Q9NVE7 773 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 MCM9Q9NXL9 1143 aa19.28■□□□□ 0.68
CCM2-207ENST00000475551 KLRF2D3W0D1 207 aa19.27■□□□□ 0.68
CCM2-207ENST00000475551 PMS2P54278 862 aa19.27■□□□□ 0.68
CCM2-207ENST00000475551 PTPROQ16827 1216 aa19.27■□□□□ 0.68
CCM2-207ENST00000475551 SOGA3Q5TF21 947 aa19.27■□□□□ 0.68
CCM2-207ENST00000475551 DUPD1Q68J44 220 aa19.27■□□□□ 0.68
CCM2-207ENST00000475551 COL23A1Q86Y22 540 aaPredicted RBP19.27■□□□□ 0.68
CCM2-207ENST00000475551 TRIM51Q9BSJ1 452 aa19.27■□□□□ 0.68
CCM2-207ENST00000475551 CCDC87Q9NVE4 849 aa19.27■□□□□ 0.68
CCM2-207ENST00000475551 AGAP1Q9UPQ3 857 aa19.27■□□□□ 0.68
CCM2-207ENST00000475551 SCN7AQ01118 1682 aa19.27■□□□□ 0.68
CCM2-207ENST00000475551 AGTP01019 485 aa19.27■□□□□ 0.67
CCM2-207ENST00000475551 USP17L8P0C7I0 530 aa19.27■□□□□ 0.67
CCM2-207ENST00000475551 PTENP60484 403 aa19.27■□□□□ 0.67
CCM2-207ENST00000475551 KCNH2Q12809 1159 aa19.27■□□□□ 0.67
CCM2-207ENST00000475551 FAM133BQ5BKY9 247 aaKnown RBP19.27■□□□□ 0.67
CCM2-207ENST00000475551 C12orf60Q5U649 245 aa19.27■□□□□ 0.67
CCM2-207ENST00000475551 CHADLQ6NUI6 762 aa19.27■□□□□ 0.67
CCM2-207ENST00000475551 NUDT12Q9BQG2 462 aa19.27■□□□□ 0.67
CCM2-207ENST00000475551 KANSL2Q9H9L4 492 aa19.27■□□□□ 0.67
CCM2-207ENST00000475551 DIS3Q9Y2L1 958 aaKnown RBP19.27■□□□□ 0.67
CCM2-207ENST00000475551 USP17L3A6NCW0 530 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 USP17L4A6NCW7 530 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 H2AFZP0C0S5 128 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 CCND1P24385 295 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 DENND2CQ68D51 928 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 CDCA2Q69YH5 1023 aaPredicted RBP19.26■□□□□ 0.67
CCM2-207ENST00000475551 H2AFVQ71UI9 128 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 USP17L1Q7RTZ2 530 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 ERP44Q9BS26 406 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 MYH14Q7Z406 1995 aaKnown RBP19.26■□□□□ 0.67
CCM2-207ENST00000475551 ESYT2A0FGR8 921 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 POTEMA6NI47 508 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 WTIPA6NIX2 430 aaPredicted RBP19.26■□□□□ 0.67
CCM2-207ENST00000475551 RGS16O15492 202 aaPredicted RBP19.26■□□□□ 0.67
CCM2-207ENST00000475551 UCHL3P15374 230 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 ZNF131P52739 623 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 NCALDP61601 193 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 ICA1Q05084 483 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 C6orf118Q5T5N4 469 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 DAAM2Q86T65 1068 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 REXO1Q8N1G1 1221 aaKnown RBP19.26■□□□□ 0.67
CCM2-207ENST00000475551 SPDL1Q96EA4 605 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 PRMT1Q99873 361 aaKnown RBP19.26■□□□□ 0.67
CCM2-207ENST00000475551 TMEM47Q9BQJ4 181 aa19.26■□□□□ 0.67
CCM2-207ENST00000475551 CNOT7Q9UIV1 285 aaKnown RBP19.26■□□□□ 0.67
CCM2-207ENST00000475551 TAF1LQ8IZX4 1826 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 FAM187AA6NFU0 413 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 FGGP02679 453 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 RARAP10276 462 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 DRG2P55039 364 aaKnown RBP19.25■□□□□ 0.67
CCM2-207ENST00000475551 EN1Q05925 392 aaPredicted RBP19.25■□□□□ 0.67
CCM2-207ENST00000475551 KLRC3Q07444 240 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 SMIM5Q71RC9 77 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 RNF25Q96BH1 459 aaPredicted RBP19.25■□□□□ 0.67
CCM2-207ENST00000475551 ZNF570Q96NI8 536 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 MOV10L1Q9BXT6 1211 aaKnown RBP19.25■□□□□ 0.67
CCM2-207ENST00000475551 TRIM31Q9BZY9 425 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 KCTD10Q9H3F6 313 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 ABCF3Q9NUQ8 709 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 BIN2Q9UBW5 565 aaPredicted RBP19.25■□□□□ 0.67
CCM2-207ENST00000475551 AMFRQ9UKV5 643 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 PCDHA2Q9Y5H9 948 aa19.25■□□□□ 0.67
CCM2-207ENST00000475551 LIN7AO14910 233 aaPredicted RBP19.25■□□□□ 0.67
CCM2-207ENST00000475551 SNX3O60493 162 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms