RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 ATP8B4Q8TF62 1192 aa16.34■□□□□ 0.21
COL2A1-205ENST00000474996 CDHR5Q9HBB8 845 aa16.34■□□□□ 0.21
COL2A1-205ENST00000474996 ERVK-5Q9HDB9 667 aa16.34■□□□□ 0.21
COL2A1-205ENST00000474996 ZNF302Q9NR11 478 aa16.34■□□□□ 0.21
COL2A1-205ENST00000474996 LRFN2Q9ULH4 789 aa16.34■□□□□ 0.21
COL2A1-205ENST00000474996 FNDC1Q4ZHG4 1894 aaPredicted RBP16.33■□□□□ 0.21
COL2A1-205ENST00000474996 IGLV3-22A0A075B6J6 115 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 ADAMTS3O15072 1205 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 DHX15O43143 795 aaKnown RBP16.33■□□□□ 0.2
COL2A1-205ENST00000474996 MGEA5O60502 916 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.2
COL2A1-205ENST00000474996 IRS1P35568 1242 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 ADD1P35611 737 aaKnown RBP16.33■□□□□ 0.2
COL2A1-205ENST00000474996 SARSP49591 514 aaKnown RBP16.33■□□□□ 0.2
COL2A1-205ENST00000474996 KRT32Q14532 448 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 SMAD2Q15796 467 aaKnown RBP16.33■□□□□ 0.2
COL2A1-205ENST00000474996 PFKFB3Q16875 520 aaPredicted RBP16.33■□□□□ 0.2
COL2A1-205ENST00000474996 CSPP1Q1MSJ5 1256 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 SWSAP1Q6NVH7 229 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 MIS18BP1Q6P0N0 1132 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 KIAA0319LQ8IZA0 1049 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 POF1BQ8WVV4 589 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 TMEM40Q8WWA1 233 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 CRYGNQ8WXF5 182 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 NOC2LQ9Y3T9 749 aaKnown RBP16.33■□□□□ 0.2
COL2A1-205ENST00000474996 COL1A2P08123 1366 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 MUC6Q6W4X9 2439 aa16.33■□□□□ 0.2
COL2A1-205ENST00000474996 ZBTB42B2RXF5 422 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 IPO5O00410 1097 aaKnown RBP16.32■□□□□ 0.2
COL2A1-205ENST00000474996 RPS6KA5O75582 802 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 CPA1P15085 419 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 ATP4AP20648 1035 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 NDUFV1P49821 464 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 METAP2P50579 478 aaKnown RBP eCLIP16.32■□□□□ 0.2
COL2A1-205ENST00000474996 RCAN1P53805 252 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 FGD1P98174 961 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 ADAM15Q13444 863 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 SMAD4Q13485 552 aaKnown RBP16.32■□□□□ 0.2
COL2A1-205ENST00000474996 ZNF484Q5JVG2 852 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 PPP2R3CQ969Q6 453 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 PPP1R16BQ96T49 567 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 CD207Q9UJ71 328 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 PCDHB7Q9Y5E2 793 aa16.32■□□□□ 0.2
COL2A1-205ENST00000474996 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 CDC45O75419 566 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 CYP3A4P08684 503 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
COL2A1-205ENST00000474996 APOBRQ0VD83 1088 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 TRMT1LQ7Z2T5 733 aaKnown RBP16.31■□□□□ 0.2
COL2A1-205ENST00000474996 CKAP2LQ8IYA6 745 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 ADAM2Q99965 735 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 ZNF577Q9BSK1 485 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 UPF3BQ9BZI7 483 aaKnown RBP16.31■□□□□ 0.2
COL2A1-205ENST00000474996 ST3GAL5Q9UNP4 418 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 PCDHGC5Q9Y5F6 944 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 WDR81Q562E7 1941 aa16.31■□□□□ 0.2
COL2A1-205ENST00000474996 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 DENND3A2RUS2 1198 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 TBKBP1A7MCY6 615 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 C22orf31O95567 290 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 NRIP1P48552 1158 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 KIZQ2M2Z5 673 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 SPOUT1Q5T280 376 aaKnown RBP16.3■□□□□ 0.2
COL2A1-205ENST00000474996 FAM102BQ5T8I3 360 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 Q6ZUG5 572 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-205ENST00000474996 RBM23Q86U06 439 aaKnown RBP16.3■□□□□ 0.2
COL2A1-205ENST00000474996 REXO1Q8N1G1 1221 aaKnown RBP16.3■□□□□ 0.2
COL2A1-205ENST00000474996 EFHBQ8N7U6 833 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-205ENST00000474996 MSLNLQ96KJ4 702 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 POP1Q99575 1024 aaKnown RBP16.3■□□□□ 0.2
COL2A1-205ENST00000474996 OSMRQ99650 979 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 RGS18Q9NS28 235 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 C1orf112Q9NSG2 853 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 CLEC1BQ9P126 229 aa16.3■□□□□ 0.2
COL2A1-205ENST00000474996 MAFBQ9Y5Q3 323 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-205ENST00000474996 C9IYK1 514 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 GPR182O15218 404 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 VTNP04004 478 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 CRYBB1P53674 252 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-205ENST00000474996 SETQ01105 290 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-205ENST00000474996 PKN1Q16512 942 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 PRR16Q569H4 304 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 ODR4Q5SWX8 454 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 ZNF746Q6NUN9 644 aaPredicted RBP16.29■□□□□ 0.2
COL2A1-205ENST00000474996 SLC24A5Q71RS6 500 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 FAM228AQ86W67 206 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 METTL13Q8N6R0 699 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 BRF1Q92994 677 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 TBC1D22BQ9NU19 505 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 HCSTQ9UBK5 93 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 MUTYHQ9UIF7 546 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 PCDHB12Q9Y5F1 795 aa16.29■□□□□ 0.2
COL2A1-205ENST00000474996 GPR32O75388 356 aa16.28■□□□□ 0.2
COL2A1-205ENST00000474996 EYA4O95677 639 aa16.28■□□□□ 0.2
COL2A1-205ENST00000474996 PSAPP07602 524 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 305 ms