RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 CCDC26Q8TAB7 109 aa17.78■□□□□ 0.44
TPR-205ENST00000474852 UHMK1Q8TAS1 419 aaKnown RBP17.78■□□□□ 0.44
TPR-205ENST00000474852 PSMD1Q99460 953 aa17.78■□□□□ 0.44
TPR-205ENST00000474852 PSTPIP2Q9H939 334 aa17.78■□□□□ 0.44
TPR-205ENST00000474852 PCDHB13Q9Y5F0 798 aa17.78■□□□□ 0.44
TPR-205ENST00000474852 KDM3AQ9Y4C1 1321 aa17.77■□□□□ 0.44
TPR-205ENST00000474852 DDX3XO00571 662 aaKnown RBP eCLIP17.77■□□□□ 0.446e-16■■■■□ 22.4
TPR-205ENST00000474852 CAND2O75155 1236 aa17.77■□□□□ 0.44
TPR-205ENST00000474852 ZBTB48P10074 688 aaPredicted RBP17.77■□□□□ 0.44
TPR-205ENST00000474852 SMARCA1P28370 1054 aa17.77■□□□□ 0.44
TPR-205ENST00000474852 KCNA1Q09470 495 aa17.77■□□□□ 0.44
TPR-205ENST00000474852 DPY19L2P1Q6NXN4 242 aa17.77■□□□□ 0.44
TPR-205ENST00000474852 FOXR2Q6PJQ5 311 aa17.77■□□□□ 0.44
TPR-205ENST00000474852 SELENOSQ9BQE4 189 aa17.77■□□□□ 0.44
TPR-205ENST00000474852 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.77■□□□□ 0.44
TPR-205ENST00000474852 CCDC188H7C350 402 aa17.77■□□□□ 0.43
TPR-205ENST00000474852 CTNND1O60716 968 aaKnown RBP17.77■□□□□ 0.43
TPR-205ENST00000474852 SHBGP04278 402 aa17.77■□□□□ 0.43
TPR-205ENST00000474852 SCTRP47872 440 aa17.77■□□□□ 0.43
TPR-205ENST00000474852 C10orf76Q5T2E6 689 aa17.77■□□□□ 0.43
TPR-205ENST00000474852 NT5DC3Q86UY8 548 aa17.77■□□□□ 0.43
TPR-205ENST00000474852 GLYCTKQ8IVS8 523 aa17.77■□□□□ 0.43
TPR-205ENST00000474852 PARP9Q8IXQ6 854 aa17.77■□□□□ 0.43
TPR-205ENST00000474852 GLG1Q92896 1179 aa17.77■□□□□ 0.43
TPR-205ENST00000474852 FMO2Q99518 471 aa17.77■□□□□ 0.43
TPR-205ENST00000474852 PNMA6FA0A0J9YX94 578 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 BTNL10A8MVZ5 291 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 RSPH10B2B2RC85 870 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 RSPH10BP0C881 870 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 GALCP54803 685 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 PLCB4Q15147 1175 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 SNCBQ16143 134 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 ASPRV1Q53RT3 343 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 PTF1AQ7RTS3 328 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 TATDN2Q93075 761 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 ACTR5Q9H9F9 607 aaPredicted RBP17.76■□□□□ 0.43
TPR-205ENST00000474852 SEPT11Q9NVA2 429 aaKnown RBP17.76■□□□□ 0.43
TPR-205ENST00000474852 GGA2Q9UJY4 613 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 hCG_1984214I3L0E3 225 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 BUB1BO60566 1050 aaPredicted RBP17.76■□□□□ 0.43
TPR-205ENST00000474852 HOXD13P35453 343 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 EDRF1Q3B7T1 1238 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 AGBL2Q5U5Z8 902 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 VPS36Q86VN1 386 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 ZNF713Q8N859 430 aaPredicted RBP17.76■□□□□ 0.43
TPR-205ENST00000474852 REEP2Q9BRK0 252 aa17.76■□□□□ 0.43
TPR-205ENST00000474852 DHX36Q9H2U1 1008 aaKnown RBP17.76■□□□□ 0.43
TPR-205ENST00000474852 BZW2Q9Y6E2 419 aaKnown RBP17.76■□□□□ 0.43
TPR-205ENST00000474852 SPDYE3A6NKU9 549 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 SFI1A8K8P3 1242 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 MRPL12P52815 198 aaKnown RBP17.75■□□□□ 0.43
TPR-205ENST00000474852 RHBDL3P58872 404 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 CYP4A11Q02928 519 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 MFSD14BQ5SR56 506 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 EIF1ADQ8N9N8 165 aaKnown RBP17.75■□□□□ 0.43
TPR-205ENST00000474852 HVCN1Q96D96 273 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 PPP1R9AQ9ULJ8 1098 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 GPR75-ASB3A0A0A6YYF3 556 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 F8W031 263 aaPredicted RBP17.75■□□□□ 0.43
TPR-205ENST00000474852 GNPATO15228 680 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 ECM2O94769 699 aaPredicted RBP17.75■□□□□ 0.43
TPR-205ENST00000474852 DRP2Q13474 957 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 KNOP1Q1ED39 458 aaKnown RBP17.75■□□□□ 0.43
TPR-205ENST00000474852 FAM228AQ86W67 206 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 SLITRK6Q9H5Y7 841 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 ERVK-5Q9HDB9 667 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 AMFRQ9UKV5 643 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 TPX2Q9ULW0 747 aaKnown RBP17.75■□□□□ 0.43
TPR-205ENST00000474852 IGSF9BQ9UPX0 1349 aa17.75■□□□□ 0.43
TPR-205ENST00000474852 SRRM3A6NNA2 597 aaPredicted RBP17.74■□□□□ 0.43
TPR-205ENST00000474852 MPHOSPH10O00566 681 aaKnown RBP17.74■□□□□ 0.43
TPR-205ENST00000474852 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
TPR-205ENST00000474852 SLC12A3P55017 1021 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 PLTPP55058 493 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 EPHA7Q15375 998 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 UBAP2Q5T6F2 1119 aaKnown RBP17.74■□□□□ 0.43
TPR-205ENST00000474852 AMIGO3Q86WK7 504 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 SUCLA2Q9P2R7 463 aaPredicted RBP17.74■□□□□ 0.43
TPR-205ENST00000474852 STXBP5LQ9Y2K9 1186 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 DCAF12L1Q5VU92 463 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 AADACL2Q6P093 401 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 FRMD5Q7Z6J6 570 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 CATSPER3Q86XQ3 398 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 LNX1Q8TBB1 728 aaPredicted RBP17.74■□□□□ 0.43
TPR-205ENST00000474852 SLC35G2Q8TBE7 412 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 N4BP2L2Q92802 583 aaPredicted RBP17.74■□□□□ 0.43
TPR-205ENST00000474852 SGSM3Q96HU1 749 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 SIX2Q9NPC8 291 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 EVI5O60447 810 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 UFL1O94874 794 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 GCNT3O95395 438 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 DRD4P21917 467 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 GIT2Q14161 759 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 NEDD9Q14511 834 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 PRR16Q569H4 304 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 PPP4R3CPQ6ZMV5 832 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 RASGEF1CQ8N431 466 aa17.74■□□□□ 0.43
TPR-205ENST00000474852 ATP8B4Q8TF62 1192 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms