RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 AKR1B1P15121 316 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 SCP2P22307 547 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 DNAJC19Q96DA6 116 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 OSBPL7Q9BZF2 842 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 NUCKS1Q9H1E3 243 aaKnown RBP13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 VCPKMTQ9H867 229 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 AMFRQ9UKV5 643 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 ABCA3Q99758 1704 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 TAF1P21675 1872 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 SHBGP04278 402 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 ZNF76P36508 570 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 ADGRF4Q8IZF3 695 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 PIGOQ8TEQ8 1089 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 HVCN1Q96D96 273 aa13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.15□□□□□ -0.38e-7■■□□□ 12.3
SKIV2L-208ENST00000474839 TACO1Q9BSH4 297 aaKnown RBP13.15□□□□□ -0.3
SKIV2L-208ENST00000474839 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 SCNN1DP51172 638 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 CYP2J2P51589 502 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 GSTO1P78417 241 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 IFI16Q16666 785 aaKnown RBP13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 PARP9Q8IXQ6 854 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 FMO2Q99518 471 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 LRRC4BQ9NT99 713 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 FSBPO95073 299 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 CDC25CP30307 473 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 HSPA9P38646 679 aaKnown RBP13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 USP11P51784 963 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 CYB5D1Q6P9G0 228 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 TRIM59Q8IWR1 403 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 HAS1Q92839 578 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 CUL5Q93034 780 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 STK38LQ9Y2H1 464 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 PCDHGC5Q9Y5F6 944 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 RFC4P35249 363 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 MRPL12P52815 198 aaKnown RBP13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 GALCP54803 685 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 SATB1Q01826 763 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 TCP10Q12799 353 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 ANKRD42Q8N9B4 389 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 THOC1Q96FV9 657 aaKnown RBP13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 AZI2Q9H6S1 392 aa13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
SKIV2L-208ENST00000474839 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 MED24O75448 989 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 MMEP08473 750 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 EZRP15311 586 aaKnown RBP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 CLNS1AP54105 237 aaKnown RBP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 UBXN2AP68543 259 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 PSMD2Q13200 908 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 ZNF746Q6NUN9 644 aaPredicted RBP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 SPATS2Q86XZ4 545 aaKnown RBP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 NEDD1Q8NHV4 660 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 BHMT2Q9H2M3 363 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 KCNK9Q9NPC2 374 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 PLCB1Q9NQ66 1216 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 DBR1Q9UK59 544 aaKnown RBP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 FOXO6A8MYZ6 492 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 SKAP2O75563 359 aaPredicted RBP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 AKAP3O75969 853 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 CHN1P15882 459 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 FGFR4P22455 802 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 ZNF572Q7Z3I7 529 aaPredicted RBP13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 ZNF804AQ7Z570 1209 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 PCDHA1Q9Y5I3 950 aa13.13□□□□□ -0.31
SKIV2L-208ENST00000474839 RGS16O15492 202 aaPredicted RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 TBCAO75347 108 aaKnown RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 TRIM49P0CI25 452 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 TRIM49CP0CI26 452 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 PON1P27169 355 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 SCTRP47872 440 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 VPS41P49754 854 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 CACNB3P54284 484 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 GTF2IP78347 998 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 IFI35P80217 286 aaPredicted RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 CUL1Q13616 776 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 ZKSCAN8Q15776 578 aaPredicted RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 SWT1Q5T5J6 900 aaKnown RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 PPP4R3AQ6IN85 833 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 PROM2Q8N271 834 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 LMBR1Q8WVP7 490 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 CTNNBL1Q8WYA6 563 aaPredicted RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 PBKQ96KB5 322 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 MXD3Q9BW11 206 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 PPP1R9AQ9ULJ8 1098 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 SUFUQ9UMX1 484 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 APBA3O96018 575 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 CYP11B2P19099 503 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 STAT1P42224 750 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 DR1Q01658 176 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 ZC2HC1CQ53FD0 456 aaPredicted RBP13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 IRF2BP2Q7Z5L9 587 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 PHLDB2Q86SQ0 1253 aa13.12□□□□□ -0.31
SKIV2L-208ENST00000474839 SLC35G2Q8TBE7 412 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms