RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 RPS3AP61247 264 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 STK3Q13188 491 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 MTFR1Q15390 333 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 Q3C1V9 767 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 TMEM119Q4V9L6 283 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 CFAP58Q5T655 872 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SMYD5Q6GMV2 418 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 NT5DC3Q86UY8 548 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 MYLK4Q86YV6 388 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 FAM13CQ8NE31 585 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 RIN3Q8TB24 985 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SYMPKQ92797 1274 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 NUCKS1Q9H1E3 243 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 KCTD10Q9H3F6 313 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 BOLA2Q9H3K6 86 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SH3GLB2Q9NR46 395 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 CHCHD3Q9NX63 227 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 CDH7Q9ULB5 785 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 PPME1Q9Y570 386 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 FAM205CA6NFA0 338 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 NBPF26B4DH59 902 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 PHACTR2O75167 634 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 NEBLO76041 1014 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 GNA14O95837 355 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 AGTP01019 485 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SHBGP04278 402 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 PTPN2P17706 415 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 LTKP29376 864 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 MAGEA10P43363 369 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 TNNT3P45378 269 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 IFT88Q13099 833 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 MSLNQ13421 630 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 TMED1Q13445 227 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 CNPY1Q3B7I2 92 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SFMBT2Q5VUG0 894 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 CC2D2BQ6DHV5 1058 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 ELMSAN1Q6PJG2 1045 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SKA1Q96BD8 255 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 ZBTB10Q96DT7 871 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 PRICKLE1Q96MT3 831 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 CCDC43Q96MW1 224 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 FMNL2Q96PY5 1086 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 STRA6Q9BX79 667 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 LRRC2Q9BYS8 371 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 PHACTR1Q9C0D0 580 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 CCDC8Q9H0W5 538 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 SIL1Q9H173 461 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 CUEDC2Q9H467 287 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 MLXIPQ9HAP2 919 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 FETUBQ9UGM5 382 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 BARX2Q9UMQ3 279 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 POLIQ9UNA4 740 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 WDR37Q9Y2I8 494 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 C2CD2Q9Y426 696 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 RALGAPA2Q2PPJ7 1873 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 ANKRD31Q8N7Z5 1873 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 CCDC162PA2VCL2 907 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 ZMYND10O75800 440 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 UBOX5O94941 541 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 ASMTLO95671 621 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 YBX3P16989 372 aaKnown RBP eCLIP4.48□□□□□ -1.692e-6■□□□□ 10.3
USP16-205ENST00000474835 HOXD13P35453 343 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 STAT6P42226 847 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 NUMBP49757 651 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 CSRP3P50461 194 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 CCDC57Q2TAC2 916 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 IRAK1BP1Q5VVH5 260 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 AP1ARQ63HQ0 302 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 NEPROQ6NW34 567 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 UGT2A3Q6UWM9 527 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 IFT20Q8IY31 132 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 GBP7Q8N8V2 638 aaPredicted RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 NUP133Q8WUM0 1156 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 AIDAQ96BJ3 306 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 MBOAT7Q96N66 472 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 MTMR9Q96QG7 549 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 PABPC3Q9H361 631 aaKnown RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 SLC24A3Q9HC58 644 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 CWC25Q9NXE8 425 aaPredicted RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 PLK2Q9NYY3 685 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 VPS54Q9P1Q0 977 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 HERC5Q9UII4 1024 aaKnown RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 PADI4Q9UM07 663 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 CHKBQ9Y259 395 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 CHMP3Q9Y3E7 222 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 FAM205AQ6ZU69 1335 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 GSG1L2A8MUP6 293 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 RGL2O15211 777 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 TYROBPO43914 113 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 TJP3O95049 919 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 GNAT1P11488 350 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 ZNF24P17028 368 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 CTCFP49711 727 aaPredicted RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 TMEM62Q0P6H9 643 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 PAK1Q13153 545 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 LAMB3Q13751 1172 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 STK38Q15208 465 aa4.48□□□□□ -1.69
USP16-205ENST00000474835 RBBP5Q15291 538 aaKnown RBP4.48□□□□□ -1.69
USP16-205ENST00000474835 HLFQ16534 295 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms