RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ORC3Q9UBD5 711 aaPredicted RBP17.1■□□□□ 0.33
VARS-223ENST00000474643 COL1A2P08123 1366 aa17.1■□□□□ 0.33
VARS-223ENST00000474643 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 ENPP3O14638 875 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 CSPG5O95196 566 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 ATG7O95352 703 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 ZNF484Q5JVG2 852 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 ZSCAN31Q96LW9 406 aaPredicted RBP17.09■□□□□ 0.33
VARS-223ENST00000474643 NECAB3Q96P71 396 aaPredicted RBP17.09■□□□□ 0.33
VARS-223ENST00000474643 KIF2CQ99661 725 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 UBE2ZQ9H832 354 aaPredicted RBP17.09■□□□□ 0.33
VARS-223ENST00000474643 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
VARS-223ENST00000474643 PADI3Q9ULW8 664 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 CEP131Q9UPN4 1083 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 SQORQ9Y6N5 450 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 REV3LO60673 3130 aa17.09■□□□□ 0.33
VARS-223ENST00000474643 STK36Q9NRP7 1315 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 IGSF9BQ9UPX0 1349 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 IGLV3-22A0A075B6J6 115 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 WDR64B1ANS9 1081 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 H3BNC9 293 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 CHMP2AO43633 222 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 GAS7O60861 476 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 DTNBO60941 627 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 RPS6KA5O75582 802 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 BMP1P13497 986 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 KCNA5P22460 613 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 BANK1Q8NDB2 785 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 FAM167AQ96KS9 214 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 TBC1D32Q96NH3 1257 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 SCLT1Q96NL6 688 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 AIFM3Q96NN9 605 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 AGO3Q9H9G7 860 aaKnown RBP17.08■□□□□ 0.32
VARS-223ENST00000474643 GABBR1Q9UBS5 961 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 PCDHA10Q9Y5I2 948 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 MUC3AQ02505 3323 aa17.08■□□□□ 0.32
VARS-223ENST00000474643 TMOD1P28289 359 aa17.07■□□□□ 0.32
VARS-223ENST00000474643 TMEM266Q2M3C6 531 aa17.07■□□□□ 0.32
VARS-223ENST00000474643 PAN2Q504Q3 1202 aaKnown RBP17.07■□□□□ 0.32
VARS-223ENST00000474643 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
VARS-223ENST00000474643 NPAS4Q8IUM7 802 aa17.07■□□□□ 0.32
VARS-223ENST00000474643 BBXQ8WY36 941 aaPredicted RBP17.07■□□□□ 0.32
VARS-223ENST00000474643 MAP7D2Q96T17 732 aa17.07■□□□□ 0.32
VARS-223ENST00000474643 PPP1R16BQ96T49 567 aa17.07■□□□□ 0.32
VARS-223ENST00000474643 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
VARS-223ENST00000474643 AKT3Q9Y243 479 aa17.07■□□□□ 0.32
VARS-223ENST00000474643 IGKV6D-21A0A0A0MT36 114 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 CTDNEP1O95476 244 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 RB1P06400 928 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 TRIM29Q14134 588 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 LRCH2Q5VUJ6 765 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 PPP2R3CQ969Q6 453 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 TEKT3Q9BXF9 490 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 NSUN3Q9H649 340 aaKnown RBP17.06■□□□□ 0.32
VARS-223ENST00000474643 NRBP2Q9NSY0 501 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 PCDHA4Q9UN74 947 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 PCDHB7Q9Y5E2 793 aa17.06■□□□□ 0.32
VARS-223ENST00000474643 COL4A6Q14031 1691 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 GPR182O15218 404 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 DHX15O43143 795 aaKnown RBP17.05■□□□□ 0.32
VARS-223ENST00000474643 BMPR1AP36894 532 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 USP11P51784 963 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 FOSBP53539 338 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 KIZQ2M2Z5 673 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 GALNT17Q6IS24 598 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 BLIDQ8IZY5 108 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 FAM177A1Q8N128 213 aaPredicted RBP17.05■□□□□ 0.32
VARS-223ENST00000474643 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
VARS-223ENST00000474643 TBCKQ8TEA7 893 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 CRYGNQ8WXF5 182 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 DISC1Q9NRI5 854 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 FAM50BQ9Y247 325 aa17.05■□□□□ 0.32
VARS-223ENST00000474643 TCF20Q9UGU0 1960 aaKnown RBP17.05■□□□□ 0.32
VARS-223ENST00000474643 KDM3AQ9Y4C1 1321 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 MAGEB2O15479 319 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 JAK2O60674 1132 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 DGKIO75912 1065 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 CIITAP33076 1130 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 JAK3P52333 1124 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 TCEAL5Q5H9L2 206 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 CMTR2Q8IYT2 770 aaKnown RBP17.04■□□□□ 0.32
VARS-223ENST00000474643 FAM184AQ8NB25 1140 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 PLVAPQ9BX97 442 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 LMAN2LQ9H0V9 348 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 BRMS1Q9HCU9 246 aa17.04■□□□□ 0.32
VARS-223ENST00000474643 NLRC5Q86WI3 1866 aa17.03■□□□□ 0.32
VARS-223ENST00000474643 ADAMTS3O15072 1205 aa17.03■□□□□ 0.32
VARS-223ENST00000474643 MARCH6O60337 910 aa17.03■□□□□ 0.32
VARS-223ENST00000474643 VTNP04004 478 aa17.03■□□□□ 0.32
VARS-223ENST00000474643 OATP04181 439 aa17.03■□□□□ 0.32
VARS-223ENST00000474643 SFNP31947 248 aa17.03■□□□□ 0.32
VARS-223ENST00000474643 SSTR3P32745 418 aaPredicted RBP17.03■□□□□ 0.32
VARS-223ENST00000474643 SARSP49591 514 aaKnown RBP17.03■□□□□ 0.32
VARS-223ENST00000474643 CRYBB1P53674 252 aaPredicted RBP17.03■□□□□ 0.32
VARS-223ENST00000474643 PRKCEQ02156 737 aa17.03■□□□□ 0.32
VARS-223ENST00000474643 PTCRAQ6ISU1 281 aaPredicted RBP17.03■□□□□ 0.32
VARS-223ENST00000474643 MIER3Q7Z3K6 550 aa17.03■□□□□ 0.32
VARS-223ENST00000474643 KIAA0319LQ8IZA0 1049 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms