RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 AFG1LQ8WV93 481 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 TRIB2Q92519 343 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 COPS5Q92905 334 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 KATNAL1Q9BW62 490 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 DNAJC25Q9H1X3 360 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 ATP6V0A4Q9HBG4 840 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 FLRT1Q9NZU1 646 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 LARSQ9P2J5 1176 aaKnown RBP11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 Q9Y3F1 56 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 PPME1Q9Y570 386 aa11.4□□□□□ -0.58
PRPF38A-202ENST00000474048 ARID2Q68CP9 1835 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 MYH11P35749 1972 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 GSTTP1A0A1W2PQM5 241 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 DGAT1O75907 488 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 RHOBTB3O94955 611 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 PRKAR2AP13861 404 aaKnown RBP11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 MARK3P27448 753 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 CTGFP29279 349 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 RFC5P40937 340 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 RARRES1P49788 294 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 CHMP4BP1P59074 171 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 TBC1D8BQ0IIM8 1120 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 CT47A1Q5JQC4 288 aaPredicted RBP11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 FAM26FQ5R3K3 315 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 FAM102BQ5T8I3 360 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 PLA2G4FQ68DD2 849 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 RINT1Q6NUQ1 792 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 MYCT1Q8N699 235 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 RNF214Q8ND24 703 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 SLC17A8Q8NDX2 589 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 PXYLP1Q8TE99 480 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 IFT74Q96LB3 600 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 TSG101Q99816 390 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 REEP2Q9BRK0 252 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 KATNBL1Q9H079 304 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 PARVGQ9HBI0 331 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 SEL1LQ9UBV2 794 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 KCNG1Q9UIX4 513 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 TSKSQ9UJT2 592 aa11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 MAFBQ9Y5Q3 323 aaPredicted RBP11.39□□□□□ -0.59
PRPF38A-202ENST00000474048 SYNRGQ9UMZ2 1314 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 A0A087WWV3 80 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 BICDL2A1A5D9 508 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 SEPT4O43236 478 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 GAS2O43903 313 aaKnown RBP11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 HBP1O60381 514 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 MSCO60682 206 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 KPNA6O60684 536 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 DUSP11O75319 330 aaKnown RBP11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 LGR5O75473 907 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 LGALS2P05162 132 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 MMP3P08254 477 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 MYL3P08590 195 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 ZNF865P0CJ78 1059 aaPredicted RBP11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 CYBAP13498 195 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 ELNP15502 786 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 ABCD1P33897 745 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 MRE11P49959 708 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 DNM2P50570 870 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 SMTNP53814 917 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 PLCB2Q00722 1185 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 COASYQ13057 564 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 MORC3Q14149 939 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 DPCR1Q3MIW9 517 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 GJC2Q5T442 439 aaPredicted RBP11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 KLHL10Q6JEL2 608 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 MAEAQ7L5Y9 396 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 RETREG2Q8NC44 543 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 ATP8B4Q8TF62 1192 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 KIFAP3Q92845 792 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 MTRQ99707 1265 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 RUSC1Q9BVN2 902 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 MRPL44Q9H9J2 332 aaKnown RBP11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 CYP26B1Q9NR63 512 aa11.38□□□□□ -0.59
PRPF38A-202ENST00000474048 IGKV6D-21A0A0A0MT36 114 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 H0YCG3 227 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 HIP1RO75146 1068 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 ZNF286BP0CG31 522 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 GUCY2CP25092 1073 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 GRK4P32298 578 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 SARSP49591 514 aaKnown RBP11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 MYL5Q02045 173 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 PAK1Q13153 545 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 DMP1Q13316 513 aaPredicted RBP11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 EMC2Q15006 297 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 PPP2R5AQ15172 486 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 FSCN1Q16658 493 aaKnown RBP11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 ODR4Q5SWX8 454 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 TRIM50Q86XT4 487 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 FAM178BQ8IXR5 827 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 ANKRD20A12PQ8NF67 263 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 SPATA20Q8TB22 786 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 BCAS3Q9H6U6 928 aa11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 HMX1Q9NP08 348 aaPredicted RBP11.37□□□□□ -0.59
PRPF38A-202ENST00000474048 XPNPEP3Q9NQH7 507 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms