RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 QARSP47897 775 aaKnown RBP15.97■□□□□ 0.15
VAMP4-203ENST00000474047 WDR5P61964 334 aaKnown RBP15.97■□□□□ 0.15
VAMP4-203ENST00000474047 TBC1D8BQ0IIM8 1120 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 ZNF174Q15697 407 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 XKR3Q5GH77 459 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 B3GNT9Q6UX72 402 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 APBB2Q92870 758 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 MAP7D2Q96T17 732 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 CELF4Q9BZC1 486 aaKnown RBP15.97■□□□□ 0.15
VAMP4-203ENST00000474047 TTC12Q9H892 705 aaPredicted RBP15.97■□□□□ 0.15
VAMP4-203ENST00000474047 SLC28A3Q9HAS3 691 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 PCDHA11Q9Y5I1 949 aa15.97■□□□□ 0.15
VAMP4-203ENST00000474047 WDR81Q562E7 1941 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 TMEM265A0A087WTH1 108 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 ZBTB42B2RXF5 422 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 C22orf31O95567 290 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 AMHP03971 560 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 P4HBP07237 508 aaKnown RBP15.96■□□□□ 0.15
VAMP4-203ENST00000474047 EPHA7Q15375 998 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 MTERF2Q49AM1 385 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 TTC38Q5R3I4 469 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 EFCAB12Q6NXP0 572 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 HERC6Q8IVU3 1022 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 NKX2-4Q9H2Z4 354 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 SEMA6BQ9H3T3 888 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 SUGCTQ9HAC7 445 aa15.96■□□□□ 0.15
VAMP4-203ENST00000474047 MGAT3Q09327 533 aa15.95■□□□□ 0.14
VAMP4-203ENST00000474047 LARP1BQ659C4 914 aaKnown RBP15.95■□□□□ 0.14
VAMP4-203ENST00000474047 KIAA0319LQ8IZA0 1049 aa15.95■□□□□ 0.14
VAMP4-203ENST00000474047 ZNF576Q9H609 170 aa15.95■□□□□ 0.14
VAMP4-203ENST00000474047 MTMR10Q9NXD2 777 aa15.95■□□□□ 0.14
VAMP4-203ENST00000474047 AKT3Q9Y243 479 aa15.95■□□□□ 0.14
VAMP4-203ENST00000474047 EVPLQ92817 2033 aa15.95■□□□□ 0.14
VAMP4-203ENST00000474047 TLL1O43897 1013 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 U2AF2P26368 475 aaKnown RBP eCLIP15.94■□□□□ 0.14
VAMP4-203ENST00000474047 TRAPPC10P48553 1259 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 DNM2P50570 870 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 ORC2Q13416 577 aaPredicted RBP15.94■□□□□ 0.14
VAMP4-203ENST00000474047 LPIN1Q14693 890 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 TCTN1Q2MV58 587 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 FBXO47Q5MNV8 452 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 TSHZ1Q6ZSZ6 1077 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 TPH2Q8IWU9 490 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 MYOCDQ8IZQ8 938 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 USP38Q8NB14 1042 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 PPP1R16BQ96T49 567 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 NIFKQ9BYG3 293 aaKnown RBP15.94■□□□□ 0.14
VAMP4-203ENST00000474047 WNT7AO00755 349 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 MYOGP15173 224 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 CLCN3P51790 818 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 DEFB103AP81534 67 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 CYP4A11Q02928 519 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 FAM117BQ6P1L5 589 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 OTUD6AQ7L8S5 288 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 LRRC71Q8N4P6 559 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 DYDC2Q96IM9 177 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 SCLT1Q96NL6 688 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 OSBPL7Q9BZF2 842 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 ZSWIM4Q9H7M6 989 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 RGL1Q9NZL6 768 aa15.94■□□□□ 0.14
VAMP4-203ENST00000474047 VTNP04004 478 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 OR52Z1P0C646 297 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 PAK2Q13177 524 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 CTTNQ14247 550 aaKnown RBP15.93■□□□□ 0.14
VAMP4-203ENST00000474047 TMEM266Q2M3C6 531 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 ODR4Q5SWX8 454 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 PPP2R2DQ66LE6 453 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.93■□□□□ 0.14
VAMP4-203ENST00000474047 CCDC43Q96MW1 224 aaKnown RBP15.93■□□□□ 0.14
VAMP4-203ENST00000474047 MTMR9Q96QG7 549 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 EIF2AK1Q9BQI3 630 aaKnown RBP15.93■□□□□ 0.14
VAMP4-203ENST00000474047 JPH2Q9BR39 696 aaPredicted RBP15.93■□□□□ 0.14
VAMP4-203ENST00000474047 SH2D3AQ9BRG2 576 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 LXNQ9BS40 222 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 TMEM60Q9H2L4 133 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 TTYH1Q9H313 450 aaPredicted RBP15.93■□□□□ 0.14
VAMP4-203ENST00000474047 YBX2Q9Y2T7 364 aaKnown RBP15.93■□□□□ 0.14
VAMP4-203ENST00000474047 SQORQ9Y6N5 450 aa15.93■□□□□ 0.14
VAMP4-203ENST00000474047 TMEM150BA6NC51 233 aa15.92■□□□□ 0.14
VAMP4-203ENST00000474047 UPP2O95045 317 aa15.92■□□□□ 0.14
VAMP4-203ENST00000474047 CD52P31358 61 aa15.92■□□□□ 0.14
VAMP4-203ENST00000474047 NFX1Q12986 1120 aaKnown RBP15.92■□□□□ 0.14
VAMP4-203ENST00000474047 KIZQ2M2Z5 673 aa15.92■□□□□ 0.14
VAMP4-203ENST00000474047 TMCO2Q7Z6W1 182 aaPredicted RBP15.92■□□□□ 0.14
VAMP4-203ENST00000474047 NEK9Q8TD19 979 aa15.92■□□□□ 0.14
VAMP4-203ENST00000474047 CEP170P1Q96L14 293 aa15.92■□□□□ 0.14
VAMP4-203ENST00000474047 KDM3AQ9Y4C1 1321 aa15.92■□□□□ 0.14
VAMP4-203ENST00000474047 RBAK-RBAKDNI3L0D1 243 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 RPS6KA5O75582 802 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 CA3P07451 260 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 YWHABP31946 246 aaKnown RBP15.91■□□□□ 0.14
VAMP4-203ENST00000474047 TECP42680 631 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 CRYBB1P53674 252 aaPredicted RBP15.91■□□□□ 0.14
VAMP4-203ENST00000474047 SPIRE1Q08AE8 756 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 TARBP2Q15633 366 aaKnown RBP15.91■□□□□ 0.14
VAMP4-203ENST00000474047 XKR9Q5GH70 373 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 PLA2G4FQ68DD2 849 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 ANO5Q75V66 913 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 C4orf19Q8IY42 314 aa15.91■□□□□ 0.14
VAMP4-203ENST00000474047 EXOC8Q8IYI6 725 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms