RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 KCNA2P16389 499 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 ATF7P17544 494 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 AVPR2P30518 371 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 TCF7P36402 384 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 GATMP50440 423 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 RBM10P98175 930 aaKnown RBP5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 TROAPQ12815 778 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 PCNX4Q63HM2 1172 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 DIEXFQ68CQ4 756 aaKnown RBP5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 MCTP2Q6DN12 878 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 XRRA1Q6P2D8 792 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 USP17L6PQ6QN14 398 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 THSD4Q6ZMP0 1018 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 RBM23Q86U06 439 aaKnown RBP5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 RTN4RL1Q86UN2 441 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 ATP8B4Q8TF62 1192 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 ATOH1Q92858 354 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 ZBTB10Q96DT7 871 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 RPGRIP1Q96KN7 1286 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 EPAS1Q99814 870 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 FTHL17Q9BXU8 183 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 IL25Q9H293 177 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 TLE6Q9H808 572 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 SENP2Q9HC62 589 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 DIAPH3Q9NSV4 1193 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 ERAP1Q9NZ08 941 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 RABGEF1Q9UJ41 708 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 PADI3Q9ULW8 664 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 SQORQ9Y6N5 450 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 IGSF9BQ9UPX0 1349 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 KAT6AQ92794 2004 aa5.91□□□□□ -1.46
SNRNP40-204ENST00000474025 PLXNA3P51805 1871 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 GSTTP1A0A1W2PQM5 241 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 FSD2A1L4K1 749 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 GOLGA8CPA6NN73 597 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 PIK3CDO00329 1044 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 DPYSL4O14531 572 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 MEIS2O14770 477 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 PER2O15055 1255 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 ATP9AO75110 1047 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 PDGFBP01127 241 aaPredicted RBP5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 RPLP2P05387 115 aaKnown RBP5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 SCG2P13521 617 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 INSRRP14616 1297 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 ID4P47928 161 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 IGBP1P78318 339 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 UBE3AQ05086 875 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 PTPN21Q16825 1174 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 DUSP6Q16828 381 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 IER5Q5VY09 327 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 PLEKHM2Q8IWE5 1019 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 GIMAP8Q8ND71 665 aaPredicted RBP5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 SEPT1Q8WYJ6 367 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 GLG1Q92896 1179 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 GPRASP2Q96D09 838 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 PCYT2Q99447 389 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 FAM49AQ9H0Q0 323 aaPredicted RBP5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 TMX1Q9H3N1 280 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 OSBPL3Q9H4L5 887 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 TLR9Q9NR96 1032 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 TRPV2Q9Y5S1 764 aa5.9□□□□□ -1.46
SNRNP40-204ENST00000474025 PLXNA4Q9HCM2 1894 aa5.9□□□□□ -1.47
SNRNP40-204ENST00000474025 RRN3P2A6NIE6 340 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 H0Y858 1186 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 HIP1O00291 1037 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 IFIT3O14879 490 aaKnown RBP5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 FSCN2O14926 492 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 MGEA5O60502 916 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 PPFIA3O75145 1194 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 FGF18O76093 207 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 STAG3L1P0CL83 205 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 ITGB5P18084 799 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 SARSP49591 514 aaKnown RBP5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 ERVFC1P60507 584 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 TMEM62Q0P6H9 643 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 PAK2Q13177 524 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 MTMR1Q13613 665 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 KCNC3Q14003 757 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 TMEM184AQ6ZMB5 413 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 ASCL5Q7RTU5 278 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 NLRX1Q86UT6 975 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 SMC5Q8IY18 1101 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 SMARCC2Q8TAQ2 1214 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 RASGRP4Q8TDF6 673 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 TRAPPC12Q8WVT3 735 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 PIBF1Q8WXW3 757 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 CUL5Q93034 780 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 WNT2BQ93097 391 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 CDHR1Q96JP9 859 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 NEK1Q96PY6 1258 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 CDCA3Q99618 268 aaPredicted RBP5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 SPZ1Q9BXG8 430 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 S1PR5Q9H228 398 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 SMARCAD1Q9H4L7 1026 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 PCDHB12Q9Y5F1 795 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 PCDHA2Q9Y5H9 948 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 TAF6LQ9Y6J9 622 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 KDM3AQ9Y4C1 1321 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 CEP250Q9BV73 2442 aa5.89□□□□□ -1.47
SNRNP40-204ENST00000474025 SMIM35A0A1B0GVV1 85 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms