RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C16orf59Q7L2K0 433 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 C4orf19Q8IY42 314 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 SPRYD3Q8NCJ5 442 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 HERVK_113Q902F9 699 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 ZBTB10Q96DT7 871 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 MAP7D2Q96T17 732 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 NIFKQ9BYG3 293 aaKnown RBP15.4■□□□□ 0.06
USF1-205ENST00000473969 ZSCAN16Q9H4T2 348 aaPredicted RBP15.4■□□□□ 0.06
USF1-205ENST00000473969 SUGCTQ9HAC7 445 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.4■□□□□ 0.06
USF1-205ENST00000473969 RGL1Q9NZL6 768 aa15.4■□□□□ 0.06
USF1-205ENST00000473969 POTEMA6NI47 508 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 SLITRK3O94933 977 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 C22orf31O95567 290 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 YWHABP31946 246 aaKnown RBP15.39■□□□□ 0.05
USF1-205ENST00000473969 IKBKEQ14164 716 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 PDIA5Q14554 519 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 LRIT3Q3SXY7 679 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 FAM26DQ5JW98 314 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 HAUS3Q68CZ6 603 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 CNKSR3Q6P9H4 555 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 SEPT8Q92599 483 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 CEP170P1Q96L14 293 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 LRWD1Q9UFC0 647 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 AKT3Q9Y243 479 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 PPME1Q9Y570 386 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 TRPV2Q9Y5S1 764 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 CDY2AQ9Y6F7 541 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 SLC4A7Q9Y6M7 1214 aa15.39■□□□□ 0.05
USF1-205ENST00000473969 NBNO60934 754 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 EFCAB14O75071 495 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 BAIAP3O94812 1187 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 CXCL10P02778 98 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 PRPHP41219 470 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 KCNJ6P48051 423 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 FXR2P51116 673 aaKnown RBP eCLIP15.38■□□□□ 0.05
USF1-205ENST00000473969 TMEM62Q0P6H9 643 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 XKR9Q5GH70 373 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 ZNF710Q8N1W2 664 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 C4orf32Q8N8J7 132 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 SLC7A3Q8WY07 619 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 SCLT1Q96NL6 688 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 HSD17B14Q9BPX1 270 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 CELF4Q9BZC1 486 aaKnown RBP15.38■□□□□ 0.05
USF1-205ENST00000473969 TUFT1Q9NNX1 390 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 CYP26B1Q9NR63 512 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 GINS2Q9Y248 185 aa15.38■□□□□ 0.05
USF1-205ENST00000473969 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.37■□□□□ 0.05
USF1-205ENST00000473969 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.37■□□□□ 0.05
USF1-205ENST00000473969 ZBTB42B2RXF5 422 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 CHRNA1P02708 482 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 POLGP54098 1239 aaPredicted RBP15.37■□□□□ 0.05
USF1-205ENST00000473969 CDC42EP1Q00587 391 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 TARBP2Q15633 366 aaKnown RBP15.37■□□□□ 0.05
USF1-205ENST00000473969 ODR4Q5SWX8 454 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 KRT79Q5XKE5 535 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 ARL6IP4Q66PJ3 421 aaKnown RBP15.37■□□□□ 0.05
USF1-205ENST00000473969 PLA2G4FQ68DD2 849 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 TRAF7Q6Q0C0 670 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 ANO5Q75V66 913 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 KIAA0319LQ8IZA0 1049 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 USP38Q8NB14 1042 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 APBB2Q92870 758 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 POLR3CQ9BUI4 534 aaPredicted RBP15.37■□□□□ 0.05
USF1-205ENST00000473969 MTMR6Q9Y217 621 aa15.37■□□□□ 0.05
USF1-205ENST00000473969 MYH9P35579 1960 aaKnown RBP15.36■□□□□ 0.05
USF1-205ENST00000473969 ABHD14A-ACY1A0A1B0GW23 586 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 TMEM150BA6NC51 233 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 STBD1O95210 358 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 LYPLA2O95372 231 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 GHRP10912 638 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 XRCC6P12956 609 aaKnown RBP eCLIP15.36■□□□□ 0.05
USF1-205ENST00000473969 CCT6AP40227 531 aaKnown RBP15.36■□□□□ 0.05
USF1-205ENST00000473969 RFC5P40937 340 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 CLCN3P51790 818 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 NPEPPSP55786 919 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 ATP2C1P98194 919 aaPredicted RBP15.36■□□□□ 0.05
USF1-205ENST00000473969 MGAT3Q09327 533 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 RESTQ13127 1097 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 LRRC71Q8N4P6 559 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 DBF4BQ8NFT6 615 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 NACC1Q96RE7 527 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 SH2D3AQ9BRG2 576 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 IFIH1Q9BYX4 1025 aaKnown RBP15.36■□□□□ 0.05
USF1-205ENST00000473969 ANKEF1Q9NU02 776 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 SQORQ9Y6N5 450 aa15.36■□□□□ 0.05
USF1-205ENST00000473969 TRIP12Q14669 1992 aaPredicted RBP15.36■□□□□ 0.05
USF1-205ENST00000473969 GAS2O43903 313 aaKnown RBP15.35■□□□□ 0.05
USF1-205ENST00000473969 VTNP04004 478 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 ATP2A2P16615 1042 aaKnown RBP15.35■□□□□ 0.05
USF1-205ENST00000473969 MUTP22033 750 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 RPA1P27694 616 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 CRYBB1P53674 252 aaPredicted RBP15.35■□□□□ 0.05
USF1-205ENST00000473969 SMAD3P84022 425 aaKnown RBP15.35■□□□□ 0.05
USF1-205ENST00000473969 MBTPS1Q14703 1052 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 GPNMBQ14956 572 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 SF3A1Q15459 793 aaKnown RBP15.35■□□□□ 0.05
USF1-205ENST00000473969 PLEKHG4Q58EX7 1191 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 TSHZ1Q6ZSZ6 1077 aa15.35■□□□□ 0.05
USF1-205ENST00000473969 CATSPER3Q86XQ3 398 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms