RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 CLIC2O15247 247 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 MAFGO15525 162 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 KIF20AO95235 890 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 TNNT1P13805 278 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 KRT9P35527 623 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 ANO5Q75V66 913 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 EEPD1Q7L9B9 569 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 FAM178BQ8IXR5 827 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 FAM133AQ8N9E0 248 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 CEP63Q96MT8 703 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 SENP7Q9BQF6 1050 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 TTYH3Q9C0H2 523 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 SLC9A2Q9UBY0 812 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 ODF2LQ9ULJ1 636 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 TRAF3IP3Q9Y228 551 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 TGFB1I1O43294 461 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 OSBPP22059 807 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 ACTR2P61160 394 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 ERVK-24P63145 666 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 EDRF1Q3B7T1 1238 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 GNPTABQ3T906 1256 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 CYFIP1Q7L576 1253 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 ZNF720Q7Z2F6 126 aa19.86■□□□□ 0.77
VARS2-206ENST00000473916 CCDC60Q8IWA6 550 aaPredicted RBP19.86■□□□□ 0.77
VARS2-206ENST00000473916 NFASCO94856 1347 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 EIF3JO75822 258 aaKnown RBP19.85■□□□□ 0.77
VARS2-206ENST00000473916 STAM2O75886 525 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 TRIM14Q14142 442 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 WDR78Q5VTH9 848 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 SWSAP1Q6NVH7 229 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 SMCR8Q8TEV9 937 aaPredicted RBP19.85■□□□□ 0.77
VARS2-206ENST00000473916 PCMTD1Q96MG8 357 aaPredicted RBP19.85■□□□□ 0.77
VARS2-206ENST00000473916 ERGIC2Q96RQ1 377 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 SIK3Q9Y2K2 1263 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 STBD1O95210 358 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 TPM1P09493 284 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 EDNRBP24530 442 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 XKR9Q5GH70 373 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 PPP4R3CPQ6ZMV5 832 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 REXO1L1PQ8IX06 675 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 MS4A4AQ96JQ5 239 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 PORCNQ9H237 461 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 TYW1Q9NV66 732 aaKnown RBP19.85■□□□□ 0.77
VARS2-206ENST00000473916 PPP2R2CQ9Y2T4 447 aa19.85■□□□□ 0.77
VARS2-206ENST00000473916 A0A0U1RQJ8 604 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 PDXKO00764 312 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 NR3C1P04150 777 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 CASP4P49662 377 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 SOX10P56693 466 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 FKBP15Q5T1M5 1219 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 TRIM59Q8IWR1 403 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 ATRIPQ8WXE1 791 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 CDHR1Q96JP9 859 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 CCDC43Q96MW1 224 aaKnown RBP19.84■□□□□ 0.77
VARS2-206ENST00000473916 MAF1Q9H063 256 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 CAPN11Q9UMQ6 739 aa19.84■□□□□ 0.77
VARS2-206ENST00000473916 EIF3DO15371 548 aaKnown RBP eCLIP19.83■□□□□ 0.771e-5■□□□□ 8.6
VARS2-206ENST00000473916 AKAP3O75969 853 aa19.83■□□□□ 0.77
VARS2-206ENST00000473916 TRIM21P19474 475 aaKnown RBP19.83■□□□□ 0.77
VARS2-206ENST00000473916 UBA1P22314 1058 aaKnown RBP19.83■□□□□ 0.77
VARS2-206ENST00000473916 FECHP22830 423 aa19.83■□□□□ 0.77
VARS2-206ENST00000473916 PTPN14Q15678 1187 aa19.83■□□□□ 0.77
VARS2-206ENST00000473916 ABHD15Q6UXT9 468 aa19.83■□□□□ 0.77
VARS2-206ENST00000473916 SMAP1Q8IYB5 467 aaPredicted RBP19.83■□□□□ 0.77
VARS2-206ENST00000473916 RDM1Q8NG50 284 aa19.83■□□□□ 0.77
VARS2-206ENST00000473916 ZNF592Q92610 1267 aa19.83■□□□□ 0.77
VARS2-206ENST00000473916 FAM207AQ9NSI2 230 aaPredicted RBP19.83■□□□□ 0.77
VARS2-206ENST00000473916 SEL1LQ9UBV2 794 aa19.83■□□□□ 0.77
VARS2-206ENST00000473916 SOCS7O14512 581 aa19.83■□□□□ 0.76
VARS2-206ENST00000473916 CETN3O15182 167 aa19.83■□□□□ 0.76
VARS2-206ENST00000473916 SLC25A27O95847 323 aa19.83■□□□□ 0.76
VARS2-206ENST00000473916 ERVK-9P63128 1117 aa19.83■□□□□ 0.76
VARS2-206ENST00000473916 GPIHBP1Q8IV16 184 aa19.83■□□□□ 0.76
VARS2-206ENST00000473916 CCDC51Q96ER9 411 aa19.83■□□□□ 0.76
VARS2-206ENST00000473916 CHP1Q99653 195 aa19.83■□□□□ 0.76
VARS2-206ENST00000473916 EFCC1Q9HA90 598 aa19.83■□□□□ 0.76
VARS2-206ENST00000473916 GBA2Q9HCG7 927 aaPredicted RBP19.83■□□□□ 0.76
VARS2-206ENST00000473916 LUC7L2Q9Y383 392 aaKnown RBP19.83■□□□□ 0.76
VARS2-206ENST00000473916 BTBD19C9JJ37 291 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 K7ENM7 598 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 CALUO43852 315 aaPredicted RBP19.82■□□□□ 0.76
VARS2-206ENST00000473916 PPP1R37O75864 691 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 CELF2O95319 508 aaKnown RBP19.82■□□□□ 0.76
VARS2-206ENST00000473916 PSAPP07602 524 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 ICAM3P32942 547 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 MARSP56192 900 aaKnown RBP19.82■□□□□ 0.76
VARS2-206ENST00000473916 APBA1Q02410 837 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 BRI3BPQ8WY22 251 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 MMP19Q99542 508 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 STRA6Q9BX79 667 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 PLXNB2O15031 1838 aa19.82■□□□□ 0.76
VARS2-206ENST00000473916 TISP43B9A030 160 aa19.81■□□□□ 0.76
VARS2-206ENST00000473916 PDHXO00330 501 aa19.81■□□□□ 0.76
VARS2-206ENST00000473916 PRKCEQ02156 737 aa19.81■□□□□ 0.76
VARS2-206ENST00000473916 KCNMA1Q12791 1236 aa19.81■□□□□ 0.76
VARS2-206ENST00000473916 WDR59Q6PJI9 974 aa19.81■□□□□ 0.76
VARS2-206ENST00000473916 DNAJC7Q99615 494 aa19.81■□□□□ 0.76
VARS2-206ENST00000473916 NMRK2Q9NPI5 230 aa19.81■□□□□ 0.76
VARS2-206ENST00000473916 SYNGAP1Q96PV0 1343 aa19.81■□□□□ 0.76
VARS2-206ENST00000473916 PLXNA1Q9UIW2 1896 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms