RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 TTYH1Q9H313 450 aaPredicted RBP21.29■■□□□ 1
PTCD3-210ENST00000473829 YBX2Q9Y2T7 364 aaKnown RBP21.29■■□□□ 1
PTCD3-210ENST00000473829 ARID2Q68CP9 1835 aa21.29■■□□□ 1
PTCD3-210ENST00000473829 TOB1P50616 345 aaPredicted RBP21.28■■□□□ 1
PTCD3-210ENST00000473829 PSMC5P62195 406 aa21.28■■□□□ 1
PTCD3-210ENST00000473829 LPIN1Q14693 890 aa21.28■■□□□ 1
PTCD3-210ENST00000473829 TARBP2Q15633 366 aaKnown RBP21.28■■□□□ 1
PTCD3-210ENST00000473829 ZNF174Q15697 407 aa21.28■■□□□ 1
PTCD3-210ENST00000473829 TTC38Q5R3I4 469 aa21.28■■□□□ 1
PTCD3-210ENST00000473829 FAM161BQ96MY7 647 aa21.28■■□□□ 1
PTCD3-210ENST00000473829 CEP89Q96ST8 783 aa21.28■■□□□ 1
PTCD3-210ENST00000473829 SH2D3AQ9BRG2 576 aa21.28■■□□□ 1
PTCD3-210ENST00000473829 SEPT9Q9UHD8 586 aaPredicted RBP21.28■■□□□ 1
PTCD3-210ENST00000473829 CEP131Q9UPN4 1083 aa21.28■■□□□ 1
PTCD3-210ENST00000473829 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.28■■□□□ 1
PTCD3-210ENST00000473829 TRPV2Q9Y5S1 764 aa21.28■■□□□ 1
PTCD3-210ENST00000473829 MYOGP15173 224 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 TXKP42681 527 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 EPHA7Q15375 998 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 XKR3Q5GH77 459 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 FBXO47Q5MNV8 452 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 ANO5Q75V66 913 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 LINC01465Q8N7H1 131 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 SLC9A7Q96T83 725 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 TTC12Q9H892 705 aaPredicted RBP21.27■■□□□ 1
PTCD3-210ENST00000473829 NRBP2Q9NSY0 501 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 RGL1Q9NZL6 768 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 PCDHA12Q9UN75 941 aa21.27■■□□□ 1
PTCD3-210ENST00000473829 ABHD14A-ACY1A0A1B0GW23 586 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 RPLP2P05387 115 aaKnown RBP21.26■□□□□ 0.99
PTCD3-210ENST00000473829 P4HBP07237 508 aaKnown RBP21.26■□□□□ 0.99
PTCD3-210ENST00000473829 QARSP47897 775 aaKnown RBP21.26■□□□□ 0.99
PTCD3-210ENST00000473829 TRAPPC10P48553 1259 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 CLCN3P51790 818 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 IKBKEQ14164 716 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 MTERF2Q49AM1 385 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 ZNF697Q5TEC3 545 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 PLA2G4FQ68DD2 849 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.26■□□□□ 0.99
PTCD3-210ENST00000473829 LRRC71Q8N4P6 559 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 SEPT8Q92599 483 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 TIFAQ96CG3 184 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 DYDC2Q96IM9 177 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 PPP1R16BQ96T49 567 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 LXNQ9BS40 222 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 NIFKQ9BYG3 293 aaKnown RBP21.26■□□□□ 0.99
PTCD3-210ENST00000473829 IFIH1Q9BYX4 1025 aaKnown RBP21.26■□□□□ 0.99
PTCD3-210ENST00000473829 AGO3Q9H9G7 860 aaKnown RBP21.26■□□□□ 0.99
PTCD3-210ENST00000473829 CDHR5Q9HBB8 845 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 MTMR10Q9NXD2 777 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 CHD7Q9P2D1 2997 aa21.26■□□□□ 0.99
PTCD3-210ENST00000473829 POTEMA6NI47 508 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 KCNJ6P48051 423 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 CYP4A11Q02928 519 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 CTTNQ14247 550 aaKnown RBP21.25■□□□□ 0.99
PTCD3-210ENST00000473829 IER5Q5VY09 327 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 MCTP1Q6DN14 999 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 HERC6Q8IVU3 1022 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 NME8Q8N427 588 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 METTL13Q8N6R0 699 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 PHOSPHO2Q8TCD6 241 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 CELF4Q9BZC1 486 aaKnown RBP21.25■□□□□ 0.99
PTCD3-210ENST00000473829 NKX2-4Q9H2Z4 354 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 NOL7Q9UMY1 257 aaKnown RBP21.25■□□□□ 0.99
PTCD3-210ENST00000473829 PCDHB6Q9Y5E3 794 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 KDM3AQ9Y4C1 1321 aa21.25■□□□□ 0.99
PTCD3-210ENST00000473829 DDX11L8A8MPP1 907 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 H3BQV1 296 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 MAGEB2O15479 319 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 VTNP04004 478 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 OR52Z1P0C646 297 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 ORC2Q13416 577 aaPredicted RBP21.24■□□□□ 0.99
PTCD3-210ENST00000473829 RAB30Q15771 203 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 EFCAB12Q6NXP0 572 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 TSHZ1Q6ZSZ6 1077 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 C4orf32Q8N8J7 132 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 ZNF579Q8NAF0 562 aaKnown RBP21.24■□□□□ 0.99
PTCD3-210ENST00000473829 TMEM40Q8WWA1 233 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 GUCD1Q96NT3 240 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 EIF2AK1Q9BQI3 630 aaKnown RBP21.24■□□□□ 0.99
PTCD3-210ENST00000473829 SEMA6BQ9H3T3 888 aa21.24■□□□□ 0.99
PTCD3-210ENST00000473829 COL6A3P12111 3177 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.23■□□□□ 0.99
PTCD3-210ENST00000473829 K7ELQ4 463 aaPredicted RBP21.23■□□□□ 0.99
PTCD3-210ENST00000473829 M0QZ92 97 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 ZBTB39O15060 712 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 SLITRK3O94933 977 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 ARHGEF15O94989 841 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 CD52P31358 61 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 NPEPPSP55786 919 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 DRP2Q13474 957 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 LARP1BQ659C4 914 aaKnown RBP21.23■□□□□ 0.99
PTCD3-210ENST00000473829 C4orf19Q8IY42 314 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 MSRAQ9UJ68 235 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 GINS2Q9Y248 185 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 PCDHA11Q9Y5I1 949 aa21.23■□□□□ 0.99
PTCD3-210ENST00000473829 TMEM265A0A087WTH1 108 aa21.22■□□□□ 0.99
PTCD3-210ENST00000473829 EFCAB14O75071 495 aa21.22■□□□□ 0.99
PTCD3-210ENST00000473829 GPR32O75388 356 aa21.22■□□□□ 0.99
PTCD3-210ENST00000473829 TBC1D8BQ0IIM8 1120 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms