RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 STX17P56962 302 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 PLCB2Q00722 1185 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 STK4Q13043 487 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 ACVR2BQ13705 512 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 CCL14Q16627 93 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 UTP14CQ5TAP6 766 aaKnown RBP11.94□□□□□ -0.5
SP140-208ENST00000473711 METTL7BQ6UX53 244 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 C1orf186Q6ZWK4 172 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 CCDC60Q8IWA6 550 aaPredicted RBP11.94□□□□□ -0.5
SP140-208ENST00000473711 CCDC65Q8IXS2 484 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 SEPT1Q8WYJ6 367 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 ATP6V0A1Q93050 837 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 SPATA33Q96N06 139 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 ARHGAP39Q9C0H5 1083 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 KATNBL1Q9H079 304 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 SLC39A2Q9NP94 309 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 ZNF302Q9NR11 478 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 RNF186Q9NXI6 227 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 FLRT1Q9NZU1 646 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 DBR1Q9UK59 544 aaKnown RBP11.94□□□□□ -0.5
SP140-208ENST00000473711 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
SP140-208ENST00000473711 KIAA1217Q5T5P2 1943 aa11.94□□□□□ -0.5
SP140-208ENST00000473711 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.93□□□□□ -0.5
SP140-208ENST00000473711 SFI1A8K8P3 1242 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 ZNF862O60290 1169 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 STBD1O95210 358 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 HOXC6P09630 235 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 MAP2K2P36507 400 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 LACTBP83111 547 aaPredicted RBP11.93□□□□□ -0.5
SP140-208ENST00000473711 COASYQ13057 564 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 XKR9Q5GH70 373 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 HERC4Q5GLZ8 1057 aaPredicted RBP11.93□□□□□ -0.5
SP140-208ENST00000473711 CT47A1Q5JQC4 288 aaPredicted RBP11.93□□□□□ -0.5
SP140-208ENST00000473711 GJC2Q5T442 439 aaPredicted RBP11.93□□□□□ -0.5
SP140-208ENST00000473711 PLA2G4FQ68DD2 849 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 PADI6Q6TGC4 694 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 OTUD6AQ7L8S5 288 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 MSL3Q8N5Y2 521 aaKnown RBP11.93□□□□□ -0.5
SP140-208ENST00000473711 SOCS4Q8WXH5 440 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 CCDC43Q96MW1 224 aaKnown RBP11.93□□□□□ -0.5
SP140-208ENST00000473711 PCYT2Q99447 389 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 SH2D3AQ9BRG2 576 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 REEP2Q9BRK0 252 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 ABHD16BQ9H3Z7 469 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 ANKEF1Q9NU02 776 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 CTNND2Q9UQB3 1225 aa11.93□□□□□ -0.5
SP140-208ENST00000473711 IGKV6D-21A0A0A0MT36 114 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 RSPH10B2B2RC85 870 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 NOP56O00567 594 aaKnown RBP11.92□□□□□ -0.5
SP140-208ENST00000473711 GH1P01241 217 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 RSPH10BP0C881 870 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 ERCC5P28715 1186 aaPredicted RBP11.92□□□□□ -0.5
SP140-208ENST00000473711 CYP2C19P33261 490 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 TCF7P36402 384 aaPredicted RBP11.92□□□□□ -0.5
SP140-208ENST00000473711 RARRES1P49788 294 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 NPEPPSP55786 919 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 SP3Q02447 781 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 PSMD2Q13200 908 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 LAMC2Q13753 1193 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 NCAPHQ15003 741 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 LRRC41Q15345 812 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 HSDL1Q3SXM5 330 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 FAM160B1Q5W0V3 765 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 IQSEC1Q6DN90 963 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 ANO5Q75V66 913 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 MAEAQ7L5Y9 396 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 TRMT44Q8IYL2 757 aaKnown RBP11.92□□□□□ -0.5
SP140-208ENST00000473711 ADSSL1Q8N142 457 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 KIAA0895Q8NCT3 520 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 NELFBQ8WX92 580 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 MED15Q96RN5 788 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 GPR20Q99678 358 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 APBA2Q99767 749 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
SP140-208ENST00000473711 GABRQQ9UN88 632 aa11.92□□□□□ -0.5
SP140-208ENST00000473711 MAFBQ9Y5Q3 323 aaPredicted RBP11.92□□□□□ -0.5
SP140-208ENST00000473711 LRRC37A2A6NM11 1700 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 PLXNA1Q9UIW2 1896 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 FRMD3A2A2Y4 597 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 IKBKBO14920 756 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 AP5Z1O43299 807 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 USO1O60763 962 aaKnown RBP11.91□□□□□ -0.5
SP140-208ENST00000473711 TBCAO75347 108 aaKnown RBP11.91□□□□□ -0.5
SP140-208ENST00000473711 FAM13AO94988 1023 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 SMPD1P17405 629 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 ATP4AP20648 1035 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 STAT5BP51692 787 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 TPM4P67936 248 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 MYL5Q02045 173 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 PRKCEQ02156 737 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 ARHGAP1Q07960 439 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 EHHADHQ08426 723 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 STIM1Q13586 685 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 KIF22Q14807 665 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 XKR3Q5GH77 459 aa11.91□□□□□ -0.5
SP140-208ENST00000473711 FAM26FQ5R3K3 315 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms