RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 NEK8Q86SG6 692 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 FBXO18Q8NFZ0 1043 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 LENG9Q96B70 501 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 ZBTB10Q96DT7 871 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 SUGCTQ9HAC7 445 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 MTUS1Q9ULD2 1270 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 SMC3Q9UQE7 1217 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.4■□□□□ 0.86
SNX4-204ENST00000473417 CDY2AQ9Y6F7 541 aa20.4■□□□□ 0.86
SNX4-204ENST00000473417 BRWD1Q9NSI6 2320 aa20.39■□□□□ 0.86
SNX4-204ENST00000473417 IPO5O00410 1097 aaKnown RBP20.39■□□□□ 0.85
SNX4-204ENST00000473417 MRPS6P82932 125 aaKnown RBP20.39■□□□□ 0.85
SNX4-204ENST00000473417 FBXO47Q5MNV8 452 aa20.39■□□□□ 0.85
SNX4-204ENST00000473417 TRAPPC12Q8WVT3 735 aa20.39■□□□□ 0.85
SNX4-204ENST00000473417 LMCD1Q9NZU5 365 aa20.39■□□□□ 0.85
SNX4-204ENST00000473417 KIF3AQ9Y496 699 aa20.39■□□□□ 0.85
SNX4-204ENST00000473417 CYP3A7-CYP3A51PA0A087WV96 503 aa20.38■□□□□ 0.85
SNX4-204ENST00000473417 POTEB3A0JP26 581 aa20.38■□□□□ 0.85
SNX4-204ENST00000473417 TNFRSF10AO00220 468 aa20.38■□□□□ 0.85
SNX4-204ENST00000473417 CYP3A7P24462 503 aa20.38■□□□□ 0.85
SNX4-204ENST00000473417 CUL4AQ13619 759 aa20.38■□□□□ 0.85
SNX4-204ENST00000473417 POTEBQ6S5H4 581 aa20.38■□□□□ 0.85
SNX4-204ENST00000473417 TSHZ1Q6ZSZ6 1077 aa20.38■□□□□ 0.85
SNX4-204ENST00000473417 CCDC60Q8IWA6 550 aaPredicted RBP20.38■□□□□ 0.85
SNX4-204ENST00000473417 C17orf80Q9BSJ5 609 aa20.38■□□□□ 0.85
SNX4-204ENST00000473417 PCDHA2Q9Y5H9 948 aa20.38■□□□□ 0.85
SNX4-204ENST00000473417 COL1A2P08123 1366 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 K7ELQ4 463 aaPredicted RBP20.37■□□□□ 0.85
SNX4-204ENST00000473417 MSH4O15457 936 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 UPP2O95045 317 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 Q4G0T1 1027 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 FAM160B1Q5W0V3 765 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 MOXD1Q6UVY6 613 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 GJA10Q969M2 543 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 YME1L1Q96TA2 773 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 FAM49AQ9H0Q0 323 aaPredicted RBP20.37■□□□□ 0.85
SNX4-204ENST00000473417 TBC1D22BQ9NU19 505 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 DDX25Q9UHL0 483 aaKnown RBP20.37■□□□□ 0.85
SNX4-204ENST00000473417 SQORQ9Y6N5 450 aa20.37■□□□□ 0.85
SNX4-204ENST00000473417 SMIM35A0A1B0GVV1 85 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 BACH1O14867 736 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 SLC37A4O43826 429 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 CCNT1O60563 726 aaKnown RBP20.36■□□□□ 0.85
SNX4-204ENST00000473417 GNL2Q13823 731 aaKnown RBP20.36■□□□□ 0.85
SNX4-204ENST00000473417 SKIV2LQ15477 1246 aaKnown RBP20.36■□□□□ 0.85
SNX4-204ENST00000473417 AAK1Q2M2I8 961 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 IER5Q5VY09 327 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 ZNF746Q6NUN9 644 aaPredicted RBP20.36■□□□□ 0.85
SNX4-204ENST00000473417 MIS18BP1Q6P0N0 1132 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 FBXO22Q8NEZ5 403 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 ADAMTS19Q8TE59 1207 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 ATP8B4Q8TF62 1192 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 SNX21Q969T3 373 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 MBOAT7Q96N66 472 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 SAMD11Q96NU1 681 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 ZNF302Q9NR11 478 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 TRPV2Q9Y5S1 764 aa20.36■□□□□ 0.85
SNX4-204ENST00000473417 FNDC1Q4ZHG4 1894 aaPredicted RBP20.35■□□□□ 0.85
SNX4-204ENST00000473417 KDM3AQ9Y4C1 1321 aa20.35■□□□□ 0.85
SNX4-204ENST00000473417 HBP1O60381 514 aa20.35■□□□□ 0.85
SNX4-204ENST00000473417 TFF2Q03403 129 aa20.35■□□□□ 0.85
SNX4-204ENST00000473417 PDXDC2PQ6P474 469 aa20.35■□□□□ 0.85
SNX4-204ENST00000473417 MTHFD1LQ6UB35 978 aa20.35■□□□□ 0.85
SNX4-204ENST00000473417 SMAP1Q8IYB5 467 aaPredicted RBP20.35■□□□□ 0.85
SNX4-204ENST00000473417 FOXP1Q9H334 677 aaPredicted RBP20.35■□□□□ 0.85
SNX4-204ENST00000473417 AGO3Q9H9G7 860 aaKnown RBP20.35■□□□□ 0.85
SNX4-204ENST00000473417 RC3H2Q9HBD1 1191 aaKnown RBP20.35■□□□□ 0.85
SNX4-204ENST00000473417 IGSF9BQ9UPX0 1349 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 M0QZ92 97 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 GCFC2P16383 781 aaKnown RBP20.34■□□□□ 0.85
SNX4-204ENST00000473417 ATP2B1P20020 1258 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 ATP4AP20648 1035 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 KRT76Q01546 638 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 TMEM62Q0P6H9 643 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 PPP4R3AQ6IN85 833 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 LINC01599Q8WXQ3 324 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 SLC5A5Q92911 643 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 NAP1L4Q99733 375 aaKnown RBP20.34■□□□□ 0.85
SNX4-204ENST00000473417 FOXD4L1Q9NU39 408 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 COG5Q9UP83 839 aa20.34■□□□□ 0.85
SNX4-204ENST00000473417 MAFBQ9Y5Q3 323 aaPredicted RBP20.34■□□□□ 0.85
SNX4-204ENST00000473417 ZBTB42B2RXF5 422 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 H3BQV1 296 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 GAS7O60861 476 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 KLRC1P26715 233 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 CD52P31358 61 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 EPC2Q52LR7 807 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 ZNF484Q5JVG2 852 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 LRCH2Q5VUJ6 765 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 LARP1BQ659C4 914 aaKnown RBP20.33■□□□□ 0.85
SNX4-204ENST00000473417 SWSAP1Q6NVH7 229 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 HSCBQ8IWL3 235 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 NME8Q8N427 588 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 ETNPPLQ8TBG4 499 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 UHRF1Q96T88 793 aaPredicted RBP20.33■□□□□ 0.85
SNX4-204ENST00000473417 CELF4Q9BZC1 486 aaKnown RBP20.33■□□□□ 0.85
SNX4-204ENST00000473417 TCEAL9Q9UHQ7 104 aa20.33■□□□□ 0.85
SNX4-204ENST00000473417 ADGRA3Q8IWK6 1321 aa20.32■□□□□ 0.84
SNX4-204ENST00000473417 WNT7AO00755 349 aa20.32■□□□□ 0.84
SNX4-204ENST00000473417 ENPP3O14638 875 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms