RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 FANCCQ00597 558 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 PRKCEQ02156 737 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 LAMC2Q13753 1193 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 UGCGQ16739 394 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 HS1BP3Q53T59 392 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 CDKAL1Q5VV42 579 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 CYP4F22Q6NT55 531 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 TTI2Q6NXR4 508 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 CCDC60Q8IWA6 550 aaPredicted RBP14.2□□□□□ -0.14
VPS13D-205ENST00000473099 EMID1Q96A84 441 aaPredicted RBP14.2□□□□□ -0.14
VPS13D-205ENST00000473099 TRIM44Q96DX7 344 aaPredicted RBP14.2□□□□□ -0.14
VPS13D-205ENST00000473099 TRIM47Q96LD4 638 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 MED15Q96RN5 788 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 ZHX3Q9H4I2 956 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 THAP9Q9H5L6 903 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 AZI2Q9H6S1 392 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 LARSQ9P2J5 1176 aaKnown RBP14.2□□□□□ -0.14
VPS13D-205ENST00000473099 PCDHA2Q9Y5H9 948 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 ZSWIM8A7E2V4 1837 aa14.2□□□□□ -0.14
VPS13D-205ENST00000473099 EMSYQ7Z589 1322 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 NPHP3-ACAD11A0A0J9YXS1 232 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 GSTTP1A0A1W2PQM5 241 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 AP5Z1O43299 807 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 ZNF862O60290 1169 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 LGR5O75473 907 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 CAPN15O75808 1086 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 DGAT1O75907 488 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 GH1P01241 217 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 ABCD1P33897 745 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 SP4Q02446 784 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 RAD51AP2Q09MP3 1159 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 GRM1Q13255 1194 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 LY6KQ17RY6 165 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 BMT2Q1RMZ1 405 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 FILIP1LQ4L180 1135 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 OLFML2BQ68BL8 750 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 IQSEC1Q6DN90 963 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 TAPT1Q6NXT6 567 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 SFR1Q86XK3 245 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 EXOC8Q8IYI6 725 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 MCPH1Q8NEM0 835 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 CAPNS2Q96L46 248 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 APBA2Q99767 749 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 C17orf75Q9HAS0 396 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 NRBP2Q9NSY0 501 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 MAPK8IP1Q9UQF2 711 aa14.19□□□□□ -0.14
VPS13D-205ENST00000473099 TNPO2O14787 897 aaKnown RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 ZBTB39O15060 712 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 ARIH2O95376 493 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 OATP04181 439 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 SCP2P22307 547 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 EEF1GP26641 437 aaKnown RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 TCF7P36402 384 aaPredicted RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 CTCFP49711 727 aaPredicted RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 STAT5BP51692 787 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 FCGRTP55899 365 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 UBASH3AP57075 661 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 MAP2K1Q02750 393 aaPredicted RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 ANO5Q75V66 913 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 PLPPR4Q7Z2D5 763 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 MYCT1Q8N699 235 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 CSGALNACT2Q8N6G5 542 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 USP6NLQ92738 828 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 KIFAP3Q92845 792 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 CEP170P1Q96L14 293 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 SPATA33Q96N06 139 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 GPR20Q99678 358 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 CFHR5Q9BXR6 569 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 NIFKQ9BYG3 293 aaKnown RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 KATNBL1Q9H079 304 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 MRPL44Q9H9J2 332 aaKnown RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 SAMSN1Q9NSI8 373 aaKnown RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 IFNKQ9P0W0 207 aa14.18□□□□□ -0.14
VPS13D-205ENST00000473099 MAGEC2Q9UBF1 373 aaPredicted RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 SEPT9Q9UHD8 586 aaPredicted RBP14.18□□□□□ -0.14
VPS13D-205ENST00000473099 RSPH10B2B2RC85 870 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 USO1O60763 962 aaKnown RBP14.17□□□□□ -0.14
VPS13D-205ENST00000473099 HIP1RO75146 1068 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 STBD1O95210 358 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 SNAI1O95863 264 aaPredicted RBP14.17□□□□□ -0.14
VPS13D-205ENST00000473099 PTMAP06454 111 aaKnown RBP14.17□□□□□ -0.14
VPS13D-205ENST00000473099 TPM2P07951 284 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 RSPH10BP0C881 870 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 RTP1P59025 263 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 CACNB1Q02641 598 aaPredicted RBP14.17□□□□□ -0.14
VPS13D-205ENST00000473099 ACVR2BQ13705 512 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 EDRF1Q3B7T1 1238 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 ODR4Q5SWX8 454 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 EPM2AIP1Q7L775 607 aaPredicted RBP14.17□□□□□ -0.14
VPS13D-205ENST00000473099 FAM178BQ8IXR5 827 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 DRC7Q8IY82 874 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 NPLOC4Q8TAT6 608 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 ZNF507Q8TCN5 953 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 HPS3Q969F9 1004 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 BEGAINQ9BUH8 593 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 SMARCAD1Q9H4L7 1026 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 BCAS3Q9H6U6 928 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 CYP26B1Q9NR63 512 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 PCDHB13Q9Y5F0 798 aa14.17□□□□□ -0.14
VPS13D-205ENST00000473099 LRRC10BA6NIK2 292 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms