RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	WDR64	B1ANS9	1081 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807		H3BNC9	293 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	ENPP3	O14638	875 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	ADAMTS3	O15072	1205 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	DEXI	O95424	95 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	BMP1	P13497	986 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	CD44	P16070	742 aa	Known RBP	10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	KLRC1	P26715	233 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	STK3	Q13188	491 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	GPM6B	Q13491	265 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	BBX	Q8WY36	941 aa	Predicted RBP	10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	ZNF274	Q96GC6	653 aa	Predicted RBP	10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	FAM167A	Q96KS9	214 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	AGO3	Q9H9G7	860 aa	Known RBP	10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	PDRG1	Q9NUG6	133 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	PADI3	Q9ULW8	664 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	CEP131	Q9UPN4	1083 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	GINS2	Q9Y248	185 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	MYO7A	Q13402	2215 aa		10.1	□□□□□ -0.79
CHEK2-223	ENST00000472807	EVPL	Q92817	2033 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	GAS7	O60861	476 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	CDKL5	O76039	1030 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	C22orf31	O95567	290 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	STAG3L1	P0CL83	205 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	USP11	P51784	963 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	BTG3	Q14201	252 aa	Predicted RBP	10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	ODR4	Q5SWX8	454 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	GALNT17	Q6IS24	598 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	FAM43B	Q6ZT52	329 aa	Predicted RBP	10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	NPAS4	Q8IUM7	802 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	FAM177A1	Q8N128	213 aa	Predicted RBP	10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	METTL13	Q8N6R0	699 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	TBCK	Q8TEA7	893 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	LINC01599	Q8WXQ3	324 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	LENG9	Q96B70	501 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	RIT2	Q99578	217 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	UBE2Z	Q9H832	354 aa	Predicted RBP	10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	RC3H2	Q9HBD1	1191 aa	Known RBP	10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	GABBR1	Q9UBS5	961 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	PCDHA4	Q9UN74	947 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	C5orf42	Q9H799	3197 aa		10.09	□□□□□ -0.79
CHEK2-223	ENST00000472807	WDR81	Q562E7	1941 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	DENND3	A2RUS2	1198 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	ZBTB42	B2RXF5	422 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	C5orf67	F2Z3F1	127 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	MSH4	O15457	936 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	CHMP2A	O43633	222 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	RPS6KA5	O75582	802 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	DGKI	O75912	1065 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	RB1	P06400	928 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	ATP4A	P20648	1035 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	SFN	P31947	248 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	BMPR1A	P36894	532 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	JAK3	P52333	1124 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	PRKCE	Q02156	737 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	NFX1	Q12986	1120 aa	Known RBP	10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	TMEM266	Q2M3C6	531 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	LRCH2	Q5VUJ6	765 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	CMTR2	Q8IYT2	770 aa	Known RBP	10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	KIAA0319L	Q8IZA0	1049 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	BLID	Q8IZY5	108 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	DAGLB	Q8NCG7	672 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	BANK1	Q8NDB2	785 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	CLP1	Q92989	425 aa	Known RBP	10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	ZNF689	Q96CS4	500 aa	Predicted RBP	10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	NECAB3	Q96P71	396 aa	Predicted RBP	10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	MAP7D2	Q96T17	732 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	LARP6	Q9BRS8	491 aa	Known RBP	10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	PLVAP	Q9BX97	442 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	TEKT3	Q9BXF9	490 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	NSUN3	Q9H649	340 aa	Known RBP	10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	DISC1	Q9NRI5	854 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	PPP4R2	Q9NY27	417 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	LRFN2	Q9ULH4	789 aa		10.08	□□□□□ -0.8
CHEK2-223	ENST00000472807	GPR182	O15218	404 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	MAGEB2	O15479	319 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	VTN	P04004	478 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	OAT	P04181	439 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	XBP1	P17861	261 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	IBSP	P21815	317 aa	Predicted RBP	10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	KCNA5	P22460	613 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	TMOD1	P28289	359 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	KIZ	Q2M2Z5	673 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807		Q4G0T1	1027 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	RDM1	Q8NG50	284 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	SLC5A5	Q92911	643 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	PPP1R16B	Q96T49	567 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	OSMR	Q99650	979 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	LMAN2L	Q9H0V9	348 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	SLK	Q9H2G2	1235 aa	Predicted RBP	10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	TMX1	Q9H3N1	280 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	C1orf112	Q9NSG2	853 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	NRBP2	Q9NSY0	501 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	AKT3	Q9Y243	479 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	STK36	Q9NRP7	1315 aa		10.07	□□□□□ -0.8
CHEK2-223	ENST00000472807	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms