RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 PHC1P78364 1004 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 SLC6A3Q01959 620 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 LRRC32Q14392 662 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 TRMT10BQ6PF06 316 aaKnown RBP7.9□□□□□ -1.14
CLK1-209ENST00000472679 TMEM151BQ8IW70 566 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 CARFQ8N187 725 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 CLRN3Q8NCR9 226 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 ZNF496Q96IT1 587 aaPredicted RBP7.9□□□□□ -1.14
CLK1-209ENST00000472679 FOXB1Q99853 325 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 SPATA25Q9BR10 227 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 BTBD2Q9BX70 525 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 VTA1Q9NP79 307 aa7.9□□□□□ -1.14
CLK1-209ENST00000472679 CPEP16870 476 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 CDK11BP21127 795 aaKnown RBP7.89□□□□□ -1.15
CLK1-209ENST00000472679 CD40P25942 277 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 MYBPC3Q14896 1274 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 STILQ15468 1287 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 GPR158Q5T848 1215 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 KANK2Q63ZY3 851 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 HDGFL2Q7Z4V5 671 aaPredicted RBP7.89□□□□□ -1.15
CLK1-209ENST00000472679 ZNF610Q8N9Z0 462 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 NUDT10Q8NFP7 164 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 COG1Q8WTW3 980 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 NUDT11Q96G61 164 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 MAML3Q96JK9 1138 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 SCYL1Q96KG9 808 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 TUBGCP5Q96RT8 1024 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 OR10A5Q9H207 317 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 POFUT1Q9H488 388 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 MCM8Q9UJA3 840 aa7.89□□□□□ -1.15
CLK1-209ENST00000472679 PHLDB1Q86UU1 1377 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.88□□□□□ -1.15
CLK1-209ENST00000472679 KLHL18O94889 574 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 LSP1P33241 339 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 SLURP1P55000 103 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 CD83Q01151 205 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 ADCY1Q08828 1119 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 TTC38Q5R3I4 469 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 MCTP2Q6DN12 878 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 NME9Q86XW9 330 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 ZZZ3Q8IYH5 903 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 PRPF38AQ8NAV1 312 aaKnown RBP7.88□□□□□ -1.15
CLK1-209ENST00000472679 MYL10Q9BUA6 226 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 MSRAQ9UJ68 235 aa7.88□□□□□ -1.15
CLK1-209ENST00000472679 ELL2O00472 640 aaPredicted RBP7.87□□□□□ -1.15
CLK1-209ENST00000472679 CYP7B1O75881 506 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 ADCY8P40145 1251 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 PRAMEF9Q5VWM5 478 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 SLFN12LQ6IEE8 588 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 UNQ6494/PRO21346Q6UXR6 183 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 DPP8Q6V1X1 898 aaPredicted RBP7.87□□□□□ -1.15
CLK1-209ENST00000472679 LCNL1Q6ZST4 164 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 PHYKPLQ8IUZ5 450 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 C7orf31Q8N865 590 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 TXNDC5Q8NBS9 432 aaKnown RBP7.87□□□□□ -1.15
CLK1-209ENST00000472679 ZCRB1Q8TBF4 217 aaKnown RBP7.87□□□□□ -1.15
CLK1-209ENST00000472679 ADAMTS17Q8TE56 1095 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 E2F7Q96AV8 911 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 YTHDC1Q96MU7 727 aaKnown RBP7.87□□□□□ -1.15
CLK1-209ENST00000472679 ZDHHC5Q9C0B5 715 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 L2HGDHQ9H9P8 463 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 GOLGA2P5Q9HBQ8 144 aa7.87□□□□□ -1.15
CLK1-209ENST00000472679 TOPORSQ9NS56 1045 aaPredicted RBP7.87□□□□□ -1.15
CLK1-209ENST00000472679 ADAMTS20P59510 1910 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 H0Y858 1186 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 ULK1O75385 1050 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 PRKD3O94806 890 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 PRPF6O94906 941 aaKnown RBP7.86□□□□□ -1.15
CLK1-209ENST00000472679 APOL3O95236 402 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 CHGBP05060 677 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 ROM1Q03395 351 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 NOLC1Q14978 699 aaKnown RBP eCLIP7.86□□□□□ -1.15
CLK1-209ENST00000472679 WDR72Q3MJ13 1102 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 RNF219Q5W0B1 726 aaPredicted RBP7.86□□□□□ -1.15
CLK1-209ENST00000472679 RASSF3Q86WH2 238 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 ZNF761Q86XN6 746 aaPredicted RBP7.86□□□□□ -1.15
CLK1-209ENST00000472679 SPATS2Q86XZ4 545 aaKnown RBP7.86□□□□□ -1.15
CLK1-209ENST00000472679 KRTAP19-1Q8IUB9 90 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 ZSCAN18Q8TBC5 510 aaPredicted RBP7.86□□□□□ -1.15
CLK1-209ENST00000472679 CALML6Q8TD86 181 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 BRINP2Q9C0B6 783 aa7.86□□□□□ -1.15
CLK1-209ENST00000472679 NOC2LQ9Y3T9 749 aaKnown RBP7.86□□□□□ -1.15
CLK1-209ENST00000472679 TRIM13O60858 407 aa7.85□□□□□ -1.15
CLK1-209ENST00000472679 ZSCAN22P10073 491 aaPredicted RBP7.85□□□□□ -1.15
CLK1-209ENST00000472679 APEX1P27695 318 aaKnown RBP7.85□□□□□ -1.15
CLK1-209ENST00000472679 SESN3P58005 492 aa7.85□□□□□ -1.15
CLK1-209ENST00000472679 FAM50AQ14320 339 aaKnown RBP7.85□□□□□ -1.15
CLK1-209ENST00000472679 PDCD1Q15116 288 aa7.85□□□□□ -1.15
CLK1-209ENST00000472679 IQSEC1Q6DN90 963 aa7.85□□□□□ -1.15
CLK1-209ENST00000472679 CMIPQ8IY22 773 aa7.85□□□□□ -1.15
CLK1-209ENST00000472679 RPUSD2Q8IZ73 545 aaKnown RBP7.85□□□□□ -1.15
CLK1-209ENST00000472679 SYT8Q8NBV8 401 aa7.85□□□□□ -1.15
CLK1-209ENST00000472679 TRIM8Q9BZR9 551 aa7.85□□□□□ -1.15
CLK1-209ENST00000472679 SLC5A4Q9NY91 659 aa7.85□□□□□ -1.15
CLK1-209ENST00000472679 NOP58Q9Y2X3 529 aaKnown RBP7.85□□□□□ -1.15
CLK1-209ENST00000472679 KDM1AO60341 852 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 RAB11FIP3O75154 756 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 MOGSQ13724 837 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 ZBTB41Q5SVQ8 909 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 FRMD7Q6ZUT3 714 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms