RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 SLC12A8A0AV02 714 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 FOXP2O15409 715 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 ARHGAP6O43182 974 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 KCNQ2O43526 872 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 CDC14BO60729 498 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 FZD7O75084 574 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 AMHP03971 560 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 CD83Q01151 205 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 KANK2Q63ZY3 851 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 LRSAM1Q6UWE0 723 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 USP51Q70EK9 711 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 LARP4Q71RC2 724 aaKnown RBP eCLIP7.19□□□□□ -1.26
CD46-213ENST00000471987 OVCH1Q7RTY7 1134 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 Q8N1X5 172 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 HIPK4Q8NE63 616 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 EDAQ92838 391 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 DPYSL5Q9BPU6 564 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 Q9UFV3 132 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 PUF60Q9UHX1 559 aaKnown RBP7.19□□□□□ -1.26
CD46-213ENST00000471987 CDC42EP3Q9UKI2 254 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 ASB1Q9Y576 335 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 B3GALT1Q9Y5Z6 326 aa7.19□□□□□ -1.26
CD46-213ENST00000471987 TCRBV16S1A1N1A0A5B0 115 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 HIP1RO75146 1068 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 SDHAP31040 664 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 MEOX1P50221 254 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 NOLC1Q14978 699 aaKnown RBP eCLIP7.18□□□□□ -1.26
CD46-213ENST00000471987 TM4SF20Q53R12 229 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 C2orf27AQ580R0 203 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 AGBL4Q5VU57 503 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 TMEM200BQ69YZ2 307 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 TRIM68Q6AZZ1 485 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 USP30Q70CQ3 517 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 BRAPQ7Z569 592 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 POLNQ7Z5Q5 900 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 CALML6Q8TD86 181 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 DLG3Q92796 817 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 KIAA1683Q9H0B3 1180 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 C12orf65Q9H3J6 166 aaKnown RBP7.18□□□□□ -1.26
CD46-213ENST00000471987 SLC30A1Q9Y6M5 507 aa7.18□□□□□ -1.26
CD46-213ENST00000471987 PRAMEF22A3QJZ6 481 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 CYR61O00622 381 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 RPS19P39019 145 aaKnown RBP7.17□□□□□ -1.26
CD46-213ENST00000471987 MOGSQ13724 837 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 PCOLCEQ15113 449 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 TBR1Q16650 682 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 GRAMD4Q6IC98 578 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 RTKN2Q8IZC4 609 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 C2orf69Q8N8R5 385 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 PMFBP1Q8TBY8 1022 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 SORCS2Q96PQ0 1159 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 OR14A2Q96R54 314 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 OR10A2Q9H208 303 aa7.17□□□□□ -1.26
CD46-213ENST00000471987 MATN2O00339 956 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 ACVRL1P37023 503 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 MRE11P49959 708 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 TMEM132BQ14DG7 1078 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 TMEM177Q53S58 311 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 FSTL4Q6MZW2 842 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 FILIP1Q7Z7B0 1213 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 IGSF22Q8N9C0 903 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 FAM89AQ96GI7 184 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 PLA2G12BQ9BX93 195 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 SCAND2PQ9GZW5 306 aaPredicted RBP7.16□□□□□ -1.26
CD46-213ENST00000471987 NCOA5Q9HCD5 579 aaKnown RBP7.16□□□□□ -1.26
CD46-213ENST00000471987 PTCH2Q9Y6C5 1203 aa7.16□□□□□ -1.26
CD46-213ENST00000471987 RASSF10A6NK89 507 aa7.15□□□□□ -1.26
CD46-213ENST00000471987 GOLGA6L22H0YM25 854 aa7.15□□□□□ -1.26
CD46-213ENST00000471987 KCNA6P17658 529 aa7.15□□□□□ -1.26
CD46-213ENST00000471987 ACO1P21399 889 aaKnown RBP7.15□□□□□ -1.26
CD46-213ENST00000471987 IRF9Q00978 393 aa7.15□□□□□ -1.26
CD46-213ENST00000471987 MAP3K12Q12852 859 aa7.15□□□□□ -1.26
CD46-213ENST00000471987 ABHD17CQ6PCB6 329 aa7.15□□□□□ -1.26
CD46-213ENST00000471987 FGD2Q7Z6J4 655 aa7.15□□□□□ -1.26
CD46-213ENST00000471987 TRIM39Q9HCM9 518 aa7.15□□□□□ -1.26
CD46-213ENST00000471987 PLD2O14939 933 aa7.14□□□□□ -1.27
CD46-213ENST00000471987 MAFO75444 373 aaPredicted RBP7.14□□□□□ -1.27
CD46-213ENST00000471987 APEX1P27695 318 aaKnown RBP7.14□□□□□ -1.27
CD46-213ENST00000471987 DUSP8Q13202 625 aa7.14□□□□□ -1.27
CD46-213ENST00000471987 ARHGAP44Q17R89 818 aa7.14□□□□□ -1.27
CD46-213ENST00000471987 CATSPEREQ5SY80 951 aa7.14□□□□□ -1.27
CD46-213ENST00000471987 RNF207Q6ZRF8 634 aa7.14□□□□□ -1.27
CD46-213ENST00000471987 CFHR4Q92496 578 aa7.14□□□□□ -1.27
CD46-213ENST00000471987 BOCQ9BWV1 1114 aa7.14□□□□□ -1.27
CD46-213ENST00000471987 FAM184BQ9ULE4 1060 aa7.14□□□□□ -1.27
CD46-213ENST00000471987 B4E1Z4 1266 aa7.13□□□□□ -1.27
CD46-213ENST00000471987 NRN1LQ496H8 165 aa7.13□□□□□ -1.27
CD46-213ENST00000471987 CC2D1AQ6P1N0 951 aaPredicted RBP7.13□□□□□ -1.27
CD46-213ENST00000471987 Q6ZSN1 163 aa7.13□□□□□ -1.27
CD46-213ENST00000471987 OTOP1Q7RTM1 612 aa7.13□□□□□ -1.27
CD46-213ENST00000471987 DDX53Q86TM3 631 aaKnown RBP7.13□□□□□ -1.27
CD46-213ENST00000471987 LILRB2Q8N423 598 aa7.13□□□□□ -1.27
CD46-213ENST00000471987 ZNF341Q9BYN7 854 aa7.13□□□□□ -1.27
CD46-213ENST00000471987 NELFAQ9H3P2 528 aa7.13□□□□□ -1.27
CD46-213ENST00000471987 ZBTB48P10074 688 aaPredicted RBP7.12□□□□□ -1.27
CD46-213ENST00000471987 STAT5BP51692 787 aa7.12□□□□□ -1.27
CD46-213ENST00000471987 HMGA2P52926 109 aa7.12□□□□□ -1.27
CD46-213ENST00000471987 ALDH6A1Q02252 535 aaKnown RBP7.12□□□□□ -1.27
CD46-213ENST00000471987 FOXE3Q13461 319 aa7.12□□□□□ -1.27
CD46-213ENST00000471987 USP39Q53GS9 565 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms