RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 CRIPAKQ8N1N5 446 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 SYMPKQ92797 1274 aaKnown RBP13.04□□□□□ -0.32
COL4A3-205ENST00000471862 SAMD11Q96NU1 681 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 ASB2Q96Q27 587 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 YME1L1Q96TA2 773 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 GABBR1Q9UBS5 961 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 MTUS1Q9ULD2 1270 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 KCNJ14Q9UNX9 436 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 M0QZ92 97 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 MRPS5P82675 430 aaKnown RBP13.03□□□□□ -0.32
COL4A3-205ENST00000471862 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 LINC01465Q8N7H1 131 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 ETNPPLQ8TBG4 499 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 GJA10Q969M2 543 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 ZNF689Q96CS4 500 aaPredicted RBP13.03□□□□□ -0.32
COL4A3-205ENST00000471862 TEKT3Q9BXF9 490 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 FTHL17Q9BXU8 183 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 UNC45AQ9H3U1 944 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 CDHR5Q9HBB8 845 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 TCEAL9Q9UHQ7 104 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 PADI3Q9ULW8 664 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 KIAA1671Q9BY89 1806 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 MUC3AQ02505 3323 aa13.03□□□□□ -0.32
COL4A3-205ENST00000471862 GAS7O60861 476 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 DTNBO60941 627 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 LARGE1O95461 756 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 SEC24BO95487 1268 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 SFNP31947 248 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 JAK3P52333 1124 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 NONOQ15233 471 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL4A3-205ENST00000471862 UGCGQ16739 394 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 EPC2Q52LR7 807 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 LRCH2Q5VUJ6 765 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 KRT25Q7Z3Z0 450 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 CKAP2LQ8IYA6 745 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 RDM1Q8NG50 284 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 TMEM40Q8WWA1 233 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 FAM167AQ96KS9 214 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.33
COL4A3-205ENST00000471862 TMX1Q9H3N1 280 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 ERVK-5Q9HDB9 667 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 GJB4Q9NTQ9 266 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 CEP131Q9UPN4 1083 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 ADGRA3Q8IWK6 1321 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 NCOR1O75376 2440 aa13.02□□□□□ -0.33
COL4A3-205ENST00000471862 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
COL4A3-205ENST00000471862 H3BNC9 293 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 SLC37A4O43826 429 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 DGKIO75912 1065 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 OATP04181 439 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 CENPBP07199 599 aaPredicted RBP13.01□□□□□ -0.33
COL4A3-205ENST00000471862 FDPSP14324 419 aaKnown RBP13.01□□□□□ -0.33
COL4A3-205ENST00000471862 PAK2Q13177 524 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 ME3Q16798 604 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 INF2Q27J81 1249 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 FAM43BQ6ZT52 329 aaPredicted RBP13.01□□□□□ -0.33
COL4A3-205ENST00000471862 TMEM192Q8IY95 271 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 CLP1Q92989 425 aaKnown RBP13.01□□□□□ -0.33
COL4A3-205ENST00000471862 GTF3C6Q969F1 213 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 ORC3Q9UBD5 711 aaPredicted RBP13.01□□□□□ -0.33
COL4A3-205ENST00000471862 COG5Q9UP83 839 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 NOC2LQ9Y3T9 749 aaKnown RBP13.01□□□□□ -0.33
COL4A3-205ENST00000471862 SAMM50Q9Y512 469 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
COL4A3-205ENST00000471862 FNDC1Q4ZHG4 1894 aaPredicted RBP13□□□□□ -0.33
COL4A3-205ENST00000471862 C5orf67F2Z3F1 127 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 MAGEB2O15479 319 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 CHMP2AO43633 222 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 MGEA5O60502 916 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
COL4A3-205ENST00000471862 GPR32O75388 356 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 STBD1O95210 358 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 CRYBB1P53674 252 aaPredicted RBP13□□□□□ -0.33
COL4A3-205ENST00000471862 PRKCEQ02156 737 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 TFF2Q03403 129 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 ST3GAL1Q11201 340 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 SKIV2LQ15477 1246 aaKnown RBP13□□□□□ -0.33
COL4A3-205ENST00000471862 TARBP2Q15633 366 aaKnown RBP13□□□□□ -0.33
COL4A3-205ENST00000471862 TMEM266Q2M3C6 531 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 PPP4R3AQ6IN85 833 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 NPAS4Q8IUM7 802 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 FIBCD1Q8N539 461 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 NECAB1Q8N987 351 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
COL4A3-205ENST00000471862 OXER1Q8TDS5 423 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 MRPL38Q96DV4 380 aaKnown RBP13□□□□□ -0.33
COL4A3-205ENST00000471862 CEP89Q96ST8 783 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 KCNMB3Q9NPA1 279 aa13□□□□□ -0.33
COL4A3-205ENST00000471862 DDX25Q9UHL0 483 aaKnown RBP13□□□□□ -0.33
COL4A3-205ENST00000471862 CCDC194A0A1B0GVG4 234 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 RPS6KA5O75582 802 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 VTNP04004 478 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 BMP1P13497 986 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 GCFC2P16383 781 aaKnown RBP12.99□□□□□ -0.33
COL4A3-205ENST00000471862 XBP1P17861 261 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 CLCN3P51790 818 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 GPM6BQ13491 265 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 KIZQ2M2Z5 673 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms