RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 MGAT3Q09327 533 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 KRT40Q6A162 431 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 SWSAP1Q6NVH7 229 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 NIPA1Q7RTP0 329 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 NLRC5Q86WI3 1866 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 CCDC83Q8IWF9 413 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 TRIM22Q8IYM9 498 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 CCDC148Q8NFR7 591 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 CDHR1Q96JP9 859 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 PPP1R16BQ96T49 567 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 SH2D3AQ9BRG2 576 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 SDF4Q9BRK5 362 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 ZNF577Q9BSK1 485 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 KIAA1671Q9BY89 1806 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 UNC45AQ9H3U1 944 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 PRDM12Q9H4Q4 367 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 ZNF576Q9H609 170 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 AGO3Q9H9G7 860 aaKnown RBP10.71□□□□□ -0.69
GGPS1-204ENST00000471812 PRDM6Q9NQX0 595 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 SLC4A7Q9Y6M7 1214 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 A0A0C4DFX4 3053 aa10.71□□□□□ -0.7
GGPS1-204ENST00000471812 ARID2Q68CP9 1835 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.7□□□□□ -0.7
GGPS1-204ENST00000471812 MBLAC1A4D2B0 266 aaPredicted RBP10.7□□□□□ -0.7
GGPS1-204ENST00000471812 RSPH10B2B2RC85 870 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 EML1O00423 815 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 MAFGO15525 162 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 CA3P07451 260 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 RSPH10BP0C881 870 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 GHRP10912 638 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 STAT5BP51692 787 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 ARSIQ5FYB1 569 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 RPUSD2Q8IZ73 545 aaKnown RBP10.7□□□□□ -0.7
GGPS1-204ENST00000471812 GIMAP8Q8ND71 665 aaPredicted RBP10.7□□□□□ -0.7
GGPS1-204ENST00000471812 ETNPPLQ8TBG4 499 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 CCDC12Q8WUD4 166 aaPredicted RBP10.7□□□□□ -0.7
GGPS1-204ENST00000471812 LINC01599Q8WXQ3 324 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 SLC5A5Q92911 643 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 ZNF668Q96K58 619 aaPredicted RBP10.7□□□□□ -0.7
GGPS1-204ENST00000471812 MBOAT7Q96N66 472 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 GLT8D2Q9H1C3 349 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 SMARCAD1Q9H4L7 1026 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 ERAP1Q9NZ08 941 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 TUBE1Q9UJT0 475 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 ZNF215Q9UL58 517 aaPredicted RBP10.7□□□□□ -0.7
GGPS1-204ENST00000471812 CUL9Q8IWT3 2517 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 TTC3P53804 2025 aa10.7□□□□□ -0.7
GGPS1-204ENST00000471812 BACH1O14867 736 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 PSMD10O75832 226 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 STBD1O95210 358 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 NUDT7P0C024 238 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 RFC2P35250 354 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 LPIN1Q14693 890 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 PLEKHG4Q58EX7 1191 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 CNKSR3Q6P9H4 555 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 B3GNT9Q6UX72 402 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 PIK3AP1Q6ZUJ8 805 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 HERC6Q8IVU3 1022 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 REPIN1Q9BWE0 567 aaKnown RBP10.69□□□□□ -0.7
GGPS1-204ENST00000471812 C22orf23Q9BZE7 217 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 WRAP73Q9P2S5 460 aaPredicted RBP10.69□□□□□ -0.7
GGPS1-204ENST00000471812 GABBR1Q9UBS5 961 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 STXBP5LQ9Y2K9 1186 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 CDY2AQ9Y6F7 541 aa10.69□□□□□ -0.7
GGPS1-204ENST00000471812 NRCAMQ92823 1304 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 IGSF9BQ9UPX0 1349 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 CYP3A7-CYP3A51PA0A087WV96 503 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 BTBD18B2RXH4 712 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 CYP3A7P24462 503 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 TAP1Q03518 808 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 DRP2Q13474 957 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 LETM2Q2VYF4 491 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 FAM26DQ5JW98 314 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 VARS2Q5ST30 1063 aaKnown RBP10.68□□□□□ -0.7
GGPS1-204ENST00000471812 PDXDC2PQ6P474 469 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 PLPPR4Q7Z2D5 763 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 CCDC155Q8N6L0 562 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 BICD2Q8TD16 824 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 TMEM40Q8WWA1 233 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 HAS1Q92839 578 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 PHOX2BQ99453 314 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
GGPS1-204ENST00000471812 KIF28PB7ZC32 967 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 C22orf31O95567 290 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 PFKMP08237 780 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 KLRC1P26715 233 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 CD52P31358 61 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 RBM25P49756 843 aaKnown RBP10.67□□□□□ -0.7
GGPS1-204ENST00000471812 USP11P51784 963 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 CLCN3P51790 818 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 SETQ01105 290 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-204ENST00000471812 NONOQ15233 471 aaKnown RBP eCLIP10.67□□□□□ -0.7
GGPS1-204ENST00000471812 ANKRD1Q15327 319 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 TMEM266Q2M3C6 531 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 Q4G0T1 1027 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 FBXO47Q5MNV8 452 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 LRCH2Q5VUJ6 765 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 ZNF746Q6NUN9 644 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-204ENST00000471812 CPLX2Q6PUV4 134 aaKnown RBP10.67□□□□□ -0.7
GGPS1-204ENST00000471812 MTHFD1LQ6UB35 978 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms