RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 CTDNEP1O95476 244 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 PSAPP07602 524 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 IBSPP21815 317 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-203ENST00000471344 PAK2Q13177 524 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 TMEM192Q8IY95 271 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 SMAP1Q8IYB5 467 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-203ENST00000471344 SLC5A5Q92911 643 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 IL17RAQ96F46 866 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 TSPYL2Q9H2G4 693 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-203ENST00000471344 TCEAL9Q9UHQ7 104 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 SAMM50Q9Y512 469 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 PCDHA10Q9Y5I2 948 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 ADGRA3Q8IWK6 1321 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 MGEA5O60502 916 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 VTNP04004 478 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 BMP1P13497 986 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 GATMP50440 423 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 USP11P51784 963 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 CLCN3P51790 818 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 AK2P54819 239 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 KIZQ2M2Z5 673 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 ZNF484Q5JVG2 852 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 LRCH2Q5VUJ6 765 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 CRIPAKQ8N1N5 446 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 DAGLBQ8NCG7 672 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 TNPO1Q92973 898 aaKnown RBP17.37■□□□□ 0.37
COL1A1-203ENST00000471344 DISC1Q9NRI5 854 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 NOC2LQ9Y3T9 749 aaKnown RBP17.37■□□□□ 0.37
COL1A1-203ENST00000471344 KDM3AQ9Y4C1 1321 aa17.37■□□□□ 0.37
COL1A1-203ENST00000471344 WDR64B1ANS9 1081 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 SLC37A4O43826 429 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 PFKFB2O60825 505 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 GAS7O60861 476 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 SEC24BO95487 1268 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 CTNNB1P35222 781 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 PRKCEQ02156 737 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 GPM6BQ13491 265 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 INF2Q27J81 1249 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 LRRC71Q8N4P6 559 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 FIBCD1Q8N539 461 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 METTL13Q8N6R0 699 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 NECAB1Q8N987 351 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 OXER1Q8TDS5 423 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 BBXQ8WY36 941 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-203ENST00000471344 ZNF689Q96CS4 500 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-203ENST00000471344 UHRF1Q96T88 793 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-203ENST00000471344 OSMRQ99650 979 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 SLKQ9H2G2 1235 aaPredicted RBP17.36■□□□□ 0.37
COL1A1-203ENST00000471344 ERVK-5Q9HDB9 667 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 LMCD1Q9NZU5 365 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 SQORQ9Y6N5 450 aa17.36■□□□□ 0.37
COL1A1-203ENST00000471344 TMEM150BA6NC51 233 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 H3BNC9 293 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 PSMD10O75832 226 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 DGKIO75912 1065 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 CSPG5O95196 566 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 OATP04181 439 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 RPLP2P05387 115 aaKnown RBP17.35■□□□□ 0.37
COL1A1-203ENST00000471344 NFX1Q12986 1120 aaKnown RBP17.35■□□□□ 0.37
COL1A1-203ENST00000471344 Q4G0T1 1027 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 PAN2Q504Q3 1202 aaKnown RBP17.35■□□□□ 0.37
COL1A1-203ENST00000471344 CPLX2Q6PUV4 134 aaKnown RBP17.35■□□□□ 0.37
COL1A1-203ENST00000471344 NME8Q8N427 588 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 ETNPPLQ8TBG4 499 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 HLA-CQ95604 372 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 MRPL38Q96DV4 380 aaKnown RBP17.35■□□□□ 0.37
COL1A1-203ENST00000471344 ZNF668Q96K58 619 aaPredicted RBP17.35■□□□□ 0.37
COL1A1-203ENST00000471344 RIT2Q99578 217 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 PHF20Q9BVI0 1012 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 TEKT3Q9BXF9 490 aa17.35■□□□□ 0.37
COL1A1-203ENST00000471344 CYP3A7-CYP3A51PA0A087WV96 503 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 FAM205CA6NFA0 338 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 TNFRSF10AO00220 468 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 GPR32O75388 356 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 CYP3A7P24462 503 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 ANAPC15P60006 121 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 BTG3Q14201 252 aaPredicted RBP17.34■□□□□ 0.37
COL1A1-203ENST00000471344 NONOQ15233 471 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL1A1-203ENST00000471344 EARS2Q5JPH6 523 aaKnown RBP17.34■□□□□ 0.37
COL1A1-203ENST00000471344 B3GNT9Q6UX72 402 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 FAM228AQ86W67 206 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 LINC01465Q8N7H1 131 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 IL27Q8NEV9 243 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 MBOAT7Q96N66 472 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 SAMD11Q96NU1 681 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 STK36Q9NRP7 1315 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 COG5Q9UP83 839 aa17.34■□□□□ 0.37
COL1A1-203ENST00000471344 MRPL42Q9Y6G3 142 aaKnown RBP17.34■□□□□ 0.37
COL1A1-203ENST00000471344 GRM6O15303 877 aa17.33■□□□□ 0.36
COL1A1-203ENST00000471344 RPS6KA5O75582 802 aa17.33■□□□□ 0.36
COL1A1-203ENST00000471344 ME3Q16798 604 aa17.33■□□□□ 0.36
COL1A1-203ENST00000471344 NPAS4Q8IUM7 802 aa17.33■□□□□ 0.36
COL1A1-203ENST00000471344 CLP1Q92989 425 aaKnown RBP17.33■□□□□ 0.36
COL1A1-203ENST00000471344 SH2D3AQ9BRG2 576 aa17.33■□□□□ 0.36
COL1A1-203ENST00000471344 FTHL17Q9BXU8 183 aa17.33■□□□□ 0.36
COL1A1-203ENST00000471344 UBE2ZQ9H832 354 aaPredicted RBP17.33■□□□□ 0.36
COL1A1-203ENST00000471344 ST3GAL5Q9UNP4 418 aa17.33■□□□□ 0.36
COL1A1-203ENST00000471344 C5orf42Q9H799 3197 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 MYO7AQ13402 2215 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 CDKL5O76039 1030 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms