RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 XKR3Q5GH77 459 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 RRAGBQ5VZM2 374 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 CXCL17Q6UXB2 119 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 IQUBQ8NA54 791 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 LARP4BQ92615 738 aaKnown RBP11.05□□□□□ -0.64
SF3A1-207ENST00000471342 KCNN1Q92952 543 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 VWCEQ96DN2 955 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 NACC1Q96RE7 527 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 BLZF1Q9H2G9 400 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 BHMT2Q9H2M3 363 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 SMARCAD1Q9H4L7 1026 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 TUT1Q9H6E5 874 aaKnown RBP11.05□□□□□ -0.64
SF3A1-207ENST00000471342 GPRC5CQ9NQ84 441 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 XPNPEP3Q9NQH7 507 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 PHF24Q9UPV7 400 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 PCDHA5Q9Y5H7 936 aa11.05□□□□□ -0.64
SF3A1-207ENST00000471342 MAFO75444 373 aaPredicted RBP11.04□□□□□ -0.64
SF3A1-207ENST00000471342 SGPL1O95470 568 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 ASGR1P07306 291 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 GJB1P08034 283 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 RARBP10826 455 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 GUCY2CP25092 1073 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 MARK3P27448 753 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 ARL2P36404 184 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 GJA8P48165 433 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 PSEN2P49810 448 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 DGKDQ16760 1214 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 HAUS3Q68CZ6 603 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 TRAF7Q6Q0C0 670 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 SESTD1Q86VW0 696 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 DHX38Q92620 1227 aaKnown RBP11.04□□□□□ -0.64
SF3A1-207ENST00000471342 HPS3Q969F9 1004 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 DEFB118Q96PH6 123 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 CUEDC2Q9H467 287 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 CYP26B1Q9NR63 512 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 FAM13BQ9NYF5 915 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 USP25Q9UHP3 1055 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 ADGRA3Q8IWK6 1321 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 KDM3AQ9Y4C1 1321 aa11.04□□□□□ -0.64
SF3A1-207ENST00000471342 WDR81Q562E7 1941 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 GTPBP6O43824 516 aaPredicted RBP11.03□□□□□ -0.64
SF3A1-207ENST00000471342 MARCH6O60337 910 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 PPP1R37O75864 691 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 EDN1P05305 212 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 C6orf222P0C671 652 aaPredicted RBP11.03□□□□□ -0.64
SF3A1-207ENST00000471342 SMIM10L2AP0DMW4 78 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 SMIM10L2BP0DMW5 78 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 CNGA1P29973 690 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 SLC26A2P50443 739 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 ACLYP53396 1101 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 CACNB1Q02641 598 aaPredicted RBP11.03□□□□□ -0.64
SF3A1-207ENST00000471342 MFSD10Q14728 455 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 GPNMBQ14956 572 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 CAMK4Q16566 473 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 KIAA0753Q2KHM9 967 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 NBPF20Q3BBV1 942 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 SLC9C1Q4G0N8 1177 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 GNASQ5JWF2 1037 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 PADI6Q6TGC4 694 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 RUFY4Q6ZNE9 571 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 CCDC73Q6ZRK6 1079 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 TAS1R3Q7RTX0 852 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 DIS3LQ8TF46 1054 aaKnown RBP11.03□□□□□ -0.64
SF3A1-207ENST00000471342 U2AF1L4Q8WU68 220 aaKnown RBP11.03□□□□□ -0.64
SF3A1-207ENST00000471342 BBXQ8WY36 941 aaPredicted RBP11.03□□□□□ -0.64
SF3A1-207ENST00000471342 DDX12PQ92771 950 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 ATP6V0A1Q93050 837 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 TSEN34Q9BSV6 310 aaKnown RBP11.03□□□□□ -0.64
SF3A1-207ENST00000471342 RAB34Q9BZG1 259 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 NT5C3AQ9H0P0 336 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 TNMDQ9H2S6 317 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 IKZF4Q9H2S9 585 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 KIAA1468Q9P260 1216 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 HDAC6Q9UBN7 1215 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 MAN1B1Q9UKM7 699 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 DNM3Q9UQ16 869 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
SF3A1-207ENST00000471342 FRMPD3Q5JV73 1810 aa11.02□□□□□ -0.64
SF3A1-207ENST00000471342 SFI1A8K8P3 1242 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 HBP1O60381 514 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 MSCO60682 206 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 CAPN15O75808 1086 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 MBD3O95983 291 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
SF3A1-207ENST00000471342 STAT6P42226 847 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 AFMP43652 599 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 CPT1AP50416 773 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 CASP5P51878 434 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 MORC3Q14149 939 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 SNX17Q15036 470 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 POSTNQ15063 836 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 GDF6Q6KF10 455 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-207ENST00000471342 CAVIN1Q6NZI2 390 aaKnown RBP11.02□□□□□ -0.65
SF3A1-207ENST00000471342 EPM2AIP1Q7L775 607 aaPredicted RBP11.02□□□□□ -0.65
SF3A1-207ENST00000471342 GAS2L3Q86XJ1 694 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 KIAA0319LQ8IZA0 1049 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 TNS4Q8IZW8 715 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 KIAA0895Q8NCT3 520 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 ERMNQ8TAM6 284 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms