RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ARMCX2Q7L311 632 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 CYFIP1Q7L576 1253 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 OTUD6AQ7L8S5 288 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 CCDC186Q7Z3E2 898 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 PLEKHH3Q7Z736 793 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 IFNL1Q8IU54 200 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 FBXO16Q8IX29 292 aaPredicted RBP10.38□□□□□ -0.75
VPS52-216ENST00000471309 ZC3H3Q8IXZ2 948 aaKnown RBP10.38□□□□□ -0.75
VPS52-216ENST00000471309 DRC1Q96MC2 740 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 SRRTQ9BXP5 876 aaKnown RBP10.38□□□□□ -0.75
VPS52-216ENST00000471309 KCTD10Q9H3F6 313 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 BCAS3Q9H6U6 928 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 MRPL44Q9H9J2 332 aaKnown RBP10.38□□□□□ -0.75
VPS52-216ENST00000471309 VTA1Q9NP79 307 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 ZNF302Q9NR11 478 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 TBC1D7Q9P0N9 293 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 MAGEC2Q9UBF1 373 aaPredicted RBP10.38□□□□□ -0.75
VPS52-216ENST00000471309 NRBP1Q9UHY1 535 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 TELO2Q9Y4R8 837 aa10.38□□□□□ -0.75
VPS52-216ENST00000471309 MAFBQ9Y5Q3 323 aaPredicted RBP10.38□□□□□ -0.75
VPS52-216ENST00000471309 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS52-216ENST00000471309 ITIH6Q6UXX5 1313 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 GSTTP1A0A1W2PQM5 241 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 ESPNB1AK53 854 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 USO1O60763 962 aaKnown RBP10.37□□□□□ -0.75
VPS52-216ENST00000471309 ARIH2O95376 493 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 PBX1P40424 430 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 ALCAMQ13740 583 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 TAF1CQ15572 869 aaPredicted RBP10.37□□□□□ -0.75
VPS52-216ENST00000471309 KNOP1Q1ED39 458 aaKnown RBP10.37□□□□□ -0.75
VPS52-216ENST00000471309 XKR9Q5GH70 373 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 XKR3Q5GH77 459 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
VPS52-216ENST00000471309 FAM160B1Q5W0V3 765 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 PLA2G4FQ68DD2 849 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 SPECC1LQ69YQ0 1117 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 CCDC62Q6P9F0 684 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 EEPD1Q7L9B9 569 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 TMC6Q7Z403 805 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 FILIP1Q7Z7B0 1213 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 DAW1Q8N136 415 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 MSL3Q8N5Y2 521 aaKnown RBP10.37□□□□□ -0.75
VPS52-216ENST00000471309 MYCT1Q8N699 235 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 CCDC150Q8NCX0 1101 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 ZNF507Q8TCN5 953 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 AFAP1L1Q8TED9 768 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 SCFD2Q8WU76 684 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 CNOT6LQ96LI5 555 aaKnown RBP10.37□□□□□ -0.75
VPS52-216ENST00000471309 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 FIZ1Q96SL8 496 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 LARSQ9P2J5 1176 aaKnown RBP10.37□□□□□ -0.75
VPS52-216ENST00000471309 ABT1Q9ULW3 272 aaKnown RBP10.37□□□□□ -0.75
VPS52-216ENST00000471309 TRAF3IP3Q9Y228 551 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 MCM3APO60318 1980 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 MYH11P35749 1972 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 ZMYM2Q9UBW7 1377 aa10.37□□□□□ -0.75
VPS52-216ENST00000471309 EMSYQ7Z589 1322 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 RBM47A0AV96 593 aaKnown RBP10.36□□□□□ -0.75
VPS52-216ENST00000471309 TMEM150BA6NC51 233 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 TMEM88BA6NKF7 163 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 LGALS16A8MUM7 142 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 PDXKO00764 312 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 N4BP3O15049 544 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 TLR2O60603 784 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 PPP1R37O75864 691 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 DGAT1O75907 488 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 GCNT3O95395 438 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 OATP04181 439 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 MYBP10242 640 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 PLS3P13797 630 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 FKBP3Q00688 224 aaKnown RBP10.36□□□□□ -0.75
VPS52-216ENST00000471309 TTLL4Q14679 1199 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 LY6KQ17RY6 165 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 ODR4Q5SWX8 454 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 CELF3Q5SZQ8 465 aaKnown RBP10.36□□□□□ -0.75
VPS52-216ENST00000471309 C17orf99Q6UX52 265 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 NELFCDQ8IXH7 590 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 FAM178BQ8IXR5 827 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 SLC17A8Q8NDX2 589 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 SEPT1Q8WYJ6 367 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 MAML3Q96JK9 1138 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 STRA6Q9BX79 667 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 KATNBL1Q9H079 304 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 KCNF1Q9H3M0 494 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 ST6GALNAC4Q9H4F1 302 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 MLXIPQ9HAP2 919 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 C17orf75Q9HAS0 396 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 CYP26B1Q9NR63 512 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 TYW1Q9NV66 732 aaKnown RBP10.36□□□□□ -0.75
VPS52-216ENST00000471309 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.36□□□□□ -0.75
VPS52-216ENST00000471309 SLC5A4Q9NY91 659 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 TAB2Q9NYJ8 693 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.36□□□□□ -0.75
VPS52-216ENST00000471309 SEPT9Q9UHD8 586 aaPredicted RBP10.36□□□□□ -0.75
VPS52-216ENST00000471309 CPA4Q9UI42 421 aa10.36□□□□□ -0.75
VPS52-216ENST00000471309 SIP14410 1827 aa10.35□□□□□ -0.75
VPS52-216ENST00000471309 CALUO43852 315 aaPredicted RBP10.35□□□□□ -0.75
VPS52-216ENST00000471309 SORBS3O60504 671 aa10.35□□□□□ -0.75
VPS52-216ENST00000471309 LGR5O75473 907 aa10.35□□□□□ -0.75
VPS52-216ENST00000471309 TOMM70O94826 608 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms