RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 NUB1Q9Y5A7 615 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 SETBP1Q9Y6X0 1596 aa7.44□□□□□ -1.22
CKS1B-204ENST00000471245 A0A1W2PQ27 194 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 A0A1W2PQ64 194 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 A0A1W2PQC6 194 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 A0A1W2PQD8 194 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 MAN2B1O00754 1011 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 NKRFO15226 690 aaKnown RBP eCLIP7.43□□□□□ -1.22
CKS1B-204ENST00000471245 TGM5O43548 720 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 TSPAN6O43657 245 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 MAFKO60675 156 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 HIP1RO75146 1068 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 RNASE1P07998 156 aaKnown RBP7.43□□□□□ -1.22
CKS1B-204ENST00000471245 GDNFP39905 211 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 NR0B2Q15466 257 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 ZNF174Q15697 407 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 SLC14A2Q15849 920 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 ZBTB46Q86UZ6 589 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 PTRH1Q86Y79 214 aaKnown RBP7.43□□□□□ -1.22
CKS1B-204ENST00000471245 OXR1Q8N573 874 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 KIAA1958Q8N8K9 716 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 CLRN3Q8NCR9 226 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 AHCYL2Q96HN2 611 aaKnown RBP7.43□□□□□ -1.22
CKS1B-204ENST00000471245 YIPF4Q9BSR8 244 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 FBLN5Q9UBX5 448 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 DSEQ9UL01 958 aa7.43□□□□□ -1.22
CKS1B-204ENST00000471245 AKAP10O43572 662 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 CLASP2O75122 1294 aaKnown RBP7.42□□□□□ -1.22
CKS1B-204ENST00000471245 COL6A2P12110 1019 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 MVKQ03426 396 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 IDI1Q13907 227 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 INAVAQ3KP66 663 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 ATG4DQ86TL0 474 aaPredicted RBP7.42□□□□□ -1.22
CKS1B-204ENST00000471245 CABP7Q86V35 215 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 CBARPQ8N350 705 aaPredicted RBP7.42□□□□□ -1.22
CKS1B-204ENST00000471245 NUP43Q8NFH3 380 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 SH3RF2Q8TEC5 729 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 USP33Q8TEY7 942 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 CCDC136Q96JN2 1154 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 PCIF1Q9H4Z3 704 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 ADAMTS6Q9UKP5 1117 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 B3GALT1Q9Y5Z6 326 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 AFF2P51816 1311 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 EP400Q96L91 3159 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 LMTK2Q8IWU2 1503 aa7.42□□□□□ -1.22
CKS1B-204ENST00000471245 SHTN1A0MZ66 631 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 NOTOA8MTQ0 251 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 KRT37O76014 449 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 GJA4P35212 333 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 RAB27AP51159 221 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 KRT85P78386 507 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 KLF1Q13351 362 aaPredicted RBP7.41□□□□□ -1.22
CKS1B-204ENST00000471245 TERF2Q15554 542 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 STEAP3Q658P3 488 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 FSTL4Q6MZW2 842 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 EP400NLQ6ZTU2 488 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 DCP2Q8IU60 420 aaKnown RBP7.41□□□□□ -1.22
CKS1B-204ENST00000471245 NETO2Q8NC67 525 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 FLAD1Q8NFF5 587 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 PHOSPHO1Q8TCT1 267 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 DLG3Q92796 817 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 SLC13A1Q9BZW2 595 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 CDH19Q9H159 772 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 ERBINQ96RT1 1412 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 NCOA3Q9Y6Q9 1424 aa7.41□□□□□ -1.22
CKS1B-204ENST00000471245 DVL2O14641 736 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 SCGB1D2O95969 90 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 MSL3P1P0C860 447 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 GLI4P10075 376 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 PRKCAP17252 672 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 LSP1P33241 339 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 IRAK1P51617 712 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 EPHA5P54756 1037 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 SMAD3P84022 425 aaKnown RBP7.4□□□□□ -1.22
CKS1B-204ENST00000471245 SMAD2Q15796 467 aaKnown RBP7.4□□□□□ -1.22
CKS1B-204ENST00000471245 BROXQ5VW32 411 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 CC2D1AQ6P1N0 951 aaPredicted RBP7.4□□□□□ -1.22
CKS1B-204ENST00000471245 KCTD1Q719H9 257 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 HOOK2Q96ED9 719 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 ELF4Q99607 663 aaPredicted RBP7.4□□□□□ -1.22
CKS1B-204ENST00000471245 PLCD4Q9BRC7 762 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 PDGFDQ9GZP0 370 aaPredicted RBP7.4□□□□□ -1.22
CKS1B-204ENST00000471245 SMOC1Q9H4F8 434 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 ACSS2Q9NR19 701 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 AASDHPPTQ9NRN7 309 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 ZIM2Q9NZV7 527 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 ATP23Q9Y6H3 246 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 TNKSO95271 1327 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 ZFYVE9O95405 1425 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 NOS1P29475 1434 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 TMEM131LA2VDJ0 1609 aa7.4□□□□□ -1.22
CKS1B-204ENST00000471245 ASXL1Q8IXJ9 1541 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 SETD5Q9C0A6 1442 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 KIF15Q9NS87 1388 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 PLEKHG1Q9ULL1 1385 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 WASHC2AQ641Q2 1341 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 BIN1O00499 593 aa7.39□□□□□ -1.23
CKS1B-204ENST00000471245 HGSO14964 777 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms