RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ZBTB43O43298 467 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 PFKFB2O60825 505 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 SCG2P13521 617 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 RXRAP19793 462 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 DNAJB1P25685 340 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 PDIA3P30101 505 aaKnown RBP10.31□□□□□ -0.76
SF3A1-206ENST00000471037 NDUFV1P49821 464 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 COASYQ13057 564 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 PAK2Q13177 524 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 CUL4AQ13619 759 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 PLCB4Q15147 1175 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 ME3Q16798 604 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 TMTC3Q6ZXV5 915 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 RNF135Q8IUD6 432 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 NME8Q8N427 588 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 EFHBQ8N7U6 833 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 SMRP1Q8NCR6 262 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 GTF3C6Q969F1 213 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 ZBTB10Q96DT7 871 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 MXRA8Q9BRK3 442 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
SF3A1-206ENST00000471037 CELF4Q9BZC1 486 aaKnown RBP10.31□□□□□ -0.76
SF3A1-206ENST00000471037 IGFLR1Q9H665 355 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 CLEC1BQ9P126 229 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 MUTYHQ9UIF7 546 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 BRPF3Q9ULD4 1205 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 NAP1L2Q9ULW6 460 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-206ENST00000471037 TRPC6Q9Y210 931 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 ZNF318Q5VUA4 2279 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 STXBP3O00186 592 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 ATG7O95352 703 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 LARGE1O95461 756 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 HSP90AA1P07900 732 aaKnown RBP10.3□□□□□ -0.76
SF3A1-206ENST00000471037 MRE11P49959 708 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 SLC26A2P50443 739 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 STAT5BP51692 787 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 ACTR2P61160 394 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 TMEM62Q0P6H9 643 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 PPP1R18Q6NYC8 613 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 HEATR3Q7Z4Q2 680 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 BMP8AQ7Z5Y6 402 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 ADGRD2Q7Z7M1 963 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 MICU3Q86XE3 530 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 FANCBQ8NB91 859 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 KLHL23Q8NBE8 558 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 TRAPPC12Q8WVT3 735 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 POF1BQ8WVV4 589 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 EDAQ92838 391 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 INTS4Q96HW7 963 aaKnown RBP10.3□□□□□ -0.76
SF3A1-206ENST00000471037 MFSD14AQ96MC6 490 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 SDF4Q9BRK5 362 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 TMX1Q9H3N1 280 aa10.3□□□□□ -0.76
SF3A1-206ENST00000471037 IGKV6D-21A0A0A0MT36 114 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 CCDC196A0A1B0GTZ2 297 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 hCG_1642624A0A1W2PR95 340 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 FSD2A1L4K1 749 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 GOLGA8AA7E2F4 631 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 LOC730098B7Z3J9 87 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 hCG_1984214I3L0E3 225 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 CSPG5O95196 566 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 GLP2RO95838 553 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 FOSP01100 380 aaPredicted RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 SARSP49591 514 aaKnown RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 METAP2P50579 478 aaKnown RBP eCLIP10.29□□□□□ -0.761e-8■■□□□ 11.5
SF3A1-206ENST00000471037 KRT76Q01546 638 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 UBE3AQ05086 875 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 SCRN1Q12765 414 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 STK3Q13188 491 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 ITGB3BPQ13352 177 aaPredicted RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 CBX2Q14781 532 aaPredicted RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 RTN1Q16799 776 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 PAN2Q504Q3 1202 aaKnown RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 CEP55Q53EZ4 464 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 WWC2Q6AWC2 1192 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 CPLX2Q6PUV4 134 aaKnown RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 MTHFD1LQ6UB35 978 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 CCDC83Q8IWF9 413 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 ZNF713Q8N859 430 aaPredicted RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 CYP2W1Q8TAV3 490 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 AGO4Q9HCK5 861 aaKnown RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 RIC8AQ9NPQ8 531 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 RBM28Q9NW13 759 aaKnown RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.29□□□□□ -0.76
SF3A1-206ENST00000471037 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
SF3A1-206ENST00000471037 COL1A2P08123 1366 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 TECTAO75443 2155 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 MEIS1O00470 390 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 CDKL5O76039 1030 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 ARP10275 920 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 SREBF1P36956 1147 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 NRIP1P48552 1158 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 GATMP50440 423 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 ST3GAL1Q11201 340 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 AP3B2Q13367 1082 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 TYW1BQ6NUM6 668 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 RAB11FIP4Q86YS3 637 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 CCDC82Q8N4S0 544 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 NECAB1Q8N987 351 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 ATP8B4Q8TF62 1192 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 LLPHQ9BRT6 129 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms