RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 ATF7P17544 494 aaPredicted RBP11.35□□□□□ -0.59
RRP1B-202ENST00000470886 SP4Q02446 784 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 TTLL12Q14166 644 aaPredicted RBP11.35□□□□□ -0.59
RRP1B-202ENST00000470886 RBBP5Q15291 538 aaKnown RBP11.35□□□□□ -0.59
RRP1B-202ENST00000470886 NT5DC1Q5TFE4 455 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 C12orf60Q5U649 245 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 RFFLQ8WZ73 363 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 TTC25Q96NG3 672 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 MDH1P40925 334 aaKnown RBP11.35□□□□□ -0.59
RRP1B-202ENST00000470886 PMS2P54278 862 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 BYSLQ13895 437 aaKnown RBP11.35□□□□□ -0.59
RRP1B-202ENST00000470886 MAP7Q14244 749 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 EDRF1Q3B7T1 1238 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 ARHGEF16Q5VV41 709 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 CTAGE3PQ8IX95 158 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 UHMK1Q8TAS1 419 aaKnown RBP11.35□□□□□ -0.59
RRP1B-202ENST00000470886 CCDC127Q96BQ5 260 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 CHMP6Q96FZ7 201 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 CDHR1Q96JP9 859 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 LRRC1Q9BTT6 524 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 PTPN22Q9Y2R2 807 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 SCN11AQ9UI33 1791 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 VPS41P49754 854 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 CPXCR1Q8N123 301 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 SH3RF3Q8TEJ3 882 aaPredicted RBP11.35□□□□□ -0.59
RRP1B-202ENST00000470886 UIMC1Q96RL1 719 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 WNT8AQ9H1J5 351 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 SPATS2LQ9NUQ6 558 aaKnown RBP11.35□□□□□ -0.59
RRP1B-202ENST00000470886 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.35□□□□□ -0.59
RRP1B-202ENST00000470886 L1RE1Q9UN81 338 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 SSX2IPQ9Y2D8 614 aa11.35□□□□□ -0.59
RRP1B-202ENST00000470886 GOLGA8QA0A0J9YX86 632 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 GOLGA8OA6NCC3 632 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 GOLGA8NF8WBI6 632 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 ZNF18P17022 549 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 CDKAL1Q5VV42 579 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 RINT1Q6NUQ1 792 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 TMEM179Q6ZVK1 233 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 KCTD1Q719H9 257 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 TRAPPC11Q7Z392 1133 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 EXOC8Q8IYI6 725 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 FAM129AQ9BZQ8 928 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 NID2Q14112 1375 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 HGSO14964 777 aaPredicted RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 INHBAP08476 426 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 UBE2SQ16763 222 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 PAPD7Q5XG87 772 aaKnown RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 MSL3Q8N5Y2 521 aaKnown RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 BHMT2Q9H2M3 363 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 CRYBG1Q9Y4K1 1723 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 ESYT2A0FGR8 921 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 PABPN1LA6NDY0 278 aaKnown RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 RPS6KA4O75676 772 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 CYP2D6P10635 497 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 PIK3CAP42336 1068 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 CORO7P57737 925 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 CACNB1Q02641 598 aaPredicted RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 CDKL2Q92772 493 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 KIAA1586Q9HCI6 787 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 EPB41L4AQ9HCS5 686 aaPredicted RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 NARFQ9UHQ1 456 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 SUGT1Q9Y2Z0 365 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 CNTNAP5Q8WYK1 1306 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 POTEMA6NI47 508 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 SKIP12755 728 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 MAGOHP61326 146 aaKnown RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 SYDE1Q6ZW31 735 aaPredicted RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 NSUN4Q96CB9 384 aaKnown RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 FAM84BQ96KN1 310 aaPredicted RBP11.34□□□□□ -0.59
RRP1B-202ENST00000470886 ST7Q9NRC1 585 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 NRBP2Q9NSY0 501 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 RAB21Q9UL25 225 aa11.34□□□□□ -0.59
RRP1B-202ENST00000470886 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 LRRN2O75325 713 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 DLATP10515 647 aaKnown RBP11.33□□□□□ -0.6
RRP1B-202ENST00000470886 PRDX5P30044 214 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 STAT2P52630 851 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 SPARCL1Q14515 664 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 SURF1Q15526 300 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 PDZD4Q76G19 769 aaPredicted RBP11.33□□□□□ -0.6
RRP1B-202ENST00000470886 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 NLGN1Q8N2Q7 840 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 HVCN1Q96D96 273 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 FGFR1OP2Q9NVK5 253 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 INTUQ9ULD6 942 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 CCPG1Q9ULG6 757 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 EXOC1LA0A1B0GW35 172 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 TCRBV5S4A2TA0A5A2 114 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 NOP56O00567 594 aaKnown RBP11.33□□□□□ -0.6
RRP1B-202ENST00000470886 HNRNPDLO14979 420 aaKnown RBP11.33□□□□□ -0.6
RRP1B-202ENST00000470886 MSH2P43246 934 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 KRT81Q14533 505 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 ZYXQ15942 572 aaKnown RBP11.33□□□□□ -0.6
RRP1B-202ENST00000470886 KRT39Q6A163 491 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 CC2D2BQ6DHV5 1058 aa11.33□□□□□ -0.6
RRP1B-202ENST00000470886 CENPUQ71F23 418 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms