RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 LEXMQ3ZCV2 418 aa13.09□□□□□ -0.31
HLA-C-206ENST00000470363 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.09□□□□□ -0.31
HLA-C-206ENST00000470363 NEK9Q8TD19 979 aa13.09□□□□□ -0.31
HLA-C-206ENST00000470363 KHSRPQ92945 711 aaKnown RBP eCLIP13.09□□□□□ -0.31
HLA-C-206ENST00000470363 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
HLA-C-206ENST00000470363 CDY2AQ9Y6F7 541 aa13.09□□□□□ -0.31
HLA-C-206ENST00000470363 MYH15Q9Y2K3 1946 aa13.09□□□□□ -0.31
HLA-C-206ENST00000470363 ESYT2A0FGR8 921 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 ZBTB42B2RXF5 422 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 DGKIO75912 1065 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 RPLP2P05387 115 aaKnown RBP13.08□□□□□ -0.32
HLA-C-206ENST00000470363 ATP4AP20648 1035 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 COL9A1P20849 921 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 BMPR1AP36894 532 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 STAT5BP51692 787 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 MRPS6P82932 125 aaKnown RBP13.08□□□□□ -0.32
HLA-C-206ENST00000470363 GPM6BQ13491 265 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 TSHZ1Q6ZSZ6 1077 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 RSPH3Q86UC2 560 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 TRAPPC12Q8WVT3 735 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 ZMYND12Q9H0C1 365 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 GLT8D2Q9H1C3 349 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 EPHX3Q9H6B9 360 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 MTMR6Q9Y217 621 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 KDM3AQ9Y4C1 1321 aa13.08□□□□□ -0.32
HLA-C-206ENST00000470363 TTC3P53804 2025 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 H3BQV1 296 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 BRD1O95696 1058 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 RB1P06400 928 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 SCG2P13521 617 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 PDCP20941 246 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 CD52P31358 61 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 SLC26A2P50443 739 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 IGBP1P78318 339 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 NUCB2P80303 420 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 CAMK1Q14012 370 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 IER5Q5VY09 327 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 MTHFD1LQ6UB35 978 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 FERMT3Q86UX7 667 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 NME8Q8N427 588 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 SDF4Q9BRK5 362 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 TMX1Q9H3N1 280 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 AZI2Q9H6S1 392 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 VPS54Q9P1Q0 977 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 KCNJ14Q9UNX9 436 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 KIF3AQ9Y496 699 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 IGSF9BQ9UPX0 1349 aa13.07□□□□□ -0.32
HLA-C-206ENST00000470363 C5orf42Q9H799 3197 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 SMIM35A0A1B0GVV1 85 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 POTEB3A0JP26 581 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 GRXCR2A6NFK2 248 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 PTPROQ16827 1216 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 CTC1Q2NKJ3 1217 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 FOXD4L6Q3SYB3 417 aaPredicted RBP13.06□□□□□ -0.32
HLA-C-206ENST00000470363 TCEAL5Q5H9L2 206 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 JAKMIP3Q5VZ66 844 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 POTEBQ6S5H4 581 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 FOXD4L3Q6VB84 417 aaPredicted RBP13.06□□□□□ -0.32
HLA-C-206ENST00000470363 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
HLA-C-206ENST00000470363 FAM178BQ8IXR5 827 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 KIAA0319LQ8IZA0 1049 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 FIBCD1Q8N539 461 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 BANK1Q8NDB2 785 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 FBXO18Q8NFZ0 1043 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 WASF1Q92558 559 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 CELF4Q9BZC1 486 aaKnown RBP13.06□□□□□ -0.32
HLA-C-206ENST00000470363 FAM49AQ9H0Q0 323 aaPredicted RBP13.06□□□□□ -0.32
HLA-C-206ENST00000470363 CDHR5Q9HBB8 845 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 C11orf16Q9NQ32 467 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 RAPGEFL1Q9UHV5 662 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 PADI3Q9ULW8 664 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 ADGRA3Q8IWK6 1321 aa13.06□□□□□ -0.32
HLA-C-206ENST00000470363 KAT6AQ92794 2004 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 IPO5O00410 1097 aaKnown RBP13.05□□□□□ -0.32
HLA-C-206ENST00000470363 GRM6O15303 877 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 ZSCAN22P10073 491 aaPredicted RBP13.05□□□□□ -0.32
HLA-C-206ENST00000470363 KCNA5P22460 613 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 KLRC1P26715 233 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 CIITAP33076 1130 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 LTBRP36941 435 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 TMEM62Q0P6H9 643 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 TIGD5Q53EQ6 642 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 PLA2G4DQ86XP0 818 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 ATP8B4Q8TF62 1192 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
HLA-C-206ENST00000470363 LENG9Q96B70 501 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 PABPC5Q96DU9 382 aaKnown RBP13.05□□□□□ -0.32
HLA-C-206ENST00000470363 C1QTNF1Q9BXJ1 281 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 FTHL17Q9BXU8 183 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 TRPC6Q9Y210 931 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 MAFBQ9Y5Q3 323 aaPredicted RBP13.05□□□□□ -0.32
HLA-C-206ENST00000470363 TRPV2Q9Y5S1 764 aa13.05□□□□□ -0.32
HLA-C-206ENST00000470363 MYO7AQ13402 2215 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 PI4K2BG5E9Z4 385 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 HBP1O60381 514 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 F13A1P00488 732 aa13.04□□□□□ -0.32
HLA-C-206ENST00000470363 IL9P15248 144 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms