RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 RMDN2Q96LZ7 410 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 NUDCD1Q96RS6 583 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 EPAS1Q99814 870 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 PAIP2Q9BPZ3 127 aaKnown RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 PABPC3Q9H361 631 aaKnown RBP10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 PCDHA4Q9UN74 947 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 LAMB4A4D0S4 1761 aa10.34□□□□□ -0.75
NHLRC3-203ENST00000470258 MAGEB6P1A0A0J9YX57 407 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 RASGRF2O14827 1237 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 PPFIA2O75334 1257 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 SLC5A1P13866 664 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 PPP1R2P41236 205 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 DYNLL1P63167 89 aaKnown RBP10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 BNIP1Q12981 228 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 ALKBH5Q6P6C2 394 aaKnown RBP10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 KIF6Q6ZMV9 814 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 ADGRA1Q86SQ6 560 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 GBP7Q8N8V2 638 aaPredicted RBP10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 DDX17Q92841 729 aaKnown RBP10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 ZHX3Q9H4I2 956 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 LRP6O75581 1613 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 MYMKA6NI61 221 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 CREB1P16220 341 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 MRPS35P82673 323 aaKnown RBP10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 KLC1Q07866 573 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 ADAM9Q13443 819 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 CNGA2Q16280 664 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 TSNAXIP1Q2TAA8 658 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 ZNF449Q6P9G9 518 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 INTS8Q75QN2 995 aaKnown RBP10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 TAOK1Q7L7X3 1001 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 TEX9Q8N6V9 391 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 C7orf25Q9BPX7 421 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 ARHGEF3Q9NR81 526 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 RGL1Q9NZL6 768 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 KLHL14Q9P2G3 628 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 COL4A3BPQ9Y5P4 624 aa10.33□□□□□ -0.76
NHLRC3-203ENST00000470258 FLOT1O75955 427 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 OR52Z1P0C646 297 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ABCB4P21439 1286 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 CHRNA2Q15822 529 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 LONRF1Q17RB8 773 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 SLC5A9Q2M3M2 681 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 TBC1D25Q3MII6 688 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ZC3H12AQ5D1E8 599 aaKnown RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 C6orf118Q5T5N4 469 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 PGM2Q96G03 612 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 UIMC1Q96RL1 719 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ISCA1Q9BUE6 129 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 TRMT112Q9UI30 125 aaKnown RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ARL2BPQ9Y2Y0 163 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 MYH2Q9UKX2 1941 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 TMEM120BA0PK00 339 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 TSPY2A6NKD2 308 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 IRS4O14654 1257 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 DDAH1O94760 285 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 TARSP26639 723 aaKnown RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 CTSWP56202 376 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 CUL3Q13618 768 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 CCDC6Q16204 474 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 LRRC55Q6ZSA7 311 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ZNF571Q7Z3V5 609 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 GALNT15Q8N3T1 639 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 MARCH10Q8NA82 808 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ZBTB38Q8NAP3 1195 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 DRAXINQ8NBI3 349 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 TPCN2Q8NHX9 752 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ATP8B4Q8TF62 1192 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 U2AF1L4Q8WU68 220 aaKnown RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 RAB3IPQ96QF0 476 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 BSDC1Q9NW68 430 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 RTCBQ9Y3I0 505 aaKnown RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 USP17L12C9JPN9 530 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 USP17L21D6R901 530 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ACSL3O95573 720 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 AGTP01019 485 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 CSF1RP07333 972 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ALDH3A1P30838 453 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 LLGL1Q15334 1064 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 LRRC23Q53EV4 343 aaPredicted RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ARHGAP22Q7Z5H3 698 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 ERP44Q9BS26 406 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 CUEDC2Q9H467 287 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 SEPT11Q9NVA2 429 aaKnown RBP10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 PLCH1Q4KWH8 1693 aa10.32□□□□□ -0.76
NHLRC3-203ENST00000470258 FLT1P17948 1338 aa10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 GH1P01241 217 aa10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 GCLCP48506 637 aaPredicted RBP10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 CACNB1Q02641 598 aaPredicted RBP10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 VGLL2Q8N8G2 317 aa10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 UCMAQ8WVF2 138 aa10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 DNAJC9Q8WXX5 260 aa10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 ARHGEF2Q92974 986 aaKnown RBP10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 ZNF512BQ96KM6 892 aaPredicted RBP10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 MTA3Q9BTC8 594 aa10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 STMN4Q9H169 189 aaPredicted RBP10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 EPB41L4BQ9H329 900 aa10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 CPVLQ9H3G5 476 aa10.31□□□□□ -0.76
NHLRC3-203ENST00000470258 RNPEPL1Q9HAU8 725 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms