RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PRR16Q569H4 304 aa8.8□□□□□ -1
SMC4-212ENST00000470240 TDRD12Q587J7 1177 aaKnown RBP8.8□□□□□ -1
SMC4-212ENST00000470240 PAPD7Q5XG87 772 aaKnown RBP8.8□□□□□ -1
SMC4-212ENST00000470240 ZNF772Q68DY9 489 aaPredicted RBP8.8□□□□□ -1
SMC4-212ENST00000470240 NCAPH2Q6IBW4 605 aa8.8□□□□□ -1
SMC4-212ENST00000470240 TATDN1Q6P1N9 297 aa8.8□□□□□ -1
SMC4-212ENST00000470240 WDR93Q6P2C0 686 aa8.8□□□□□ -1
SMC4-212ENST00000470240 PDXDC1Q6P996 788 aa8.8□□□□□ -1
SMC4-212ENST00000470240 WDR59Q6PJI9 974 aa8.8□□□□□ -1
SMC4-212ENST00000470240 RRAGAQ7L523 313 aa8.8□□□□□ -1
SMC4-212ENST00000470240 VPS36Q86VN1 386 aa8.8□□□□□ -1
SMC4-212ENST00000470240 COL23A1Q86Y22 540 aaPredicted RBP8.8□□□□□ -1
SMC4-212ENST00000470240 BANK1Q8NDB2 785 aa8.8□□□□□ -1
SMC4-212ENST00000470240 HAS1Q92839 578 aa8.8□□□□□ -1
SMC4-212ENST00000470240 NOX5Q96PH1 765 aa8.8□□□□□ -1
SMC4-212ENST00000470240 RHOXF2Q9BQY4 288 aa8.8□□□□□ -1
SMC4-212ENST00000470240 METTL14Q9HCE5 456 aaKnown RBP8.8□□□□□ -1
SMC4-212ENST00000470240 KCNMB3Q9NPA1 279 aa8.8□□□□□ -1
SMC4-212ENST00000470240 CDV3Q9UKY7 258 aaKnown RBP8.8□□□□□ -1
SMC4-212ENST00000470240 SIK3Q9Y2K2 1263 aa8.8□□□□□ -1
SMC4-212ENST00000470240 RABGAP1Q9Y3P9 1069 aa8.8□□□□□ -1
SMC4-212ENST00000470240 ADAMTSL1Q8N6G6 1762 aa8.79□□□□□ -1
SMC4-212ENST00000470240 ATRNL1Q5VV63 1379 aa8.79□□□□□ -1
SMC4-212ENST00000470240 MACROD2A1Z1Q3 448 aa8.79□□□□□ -1
SMC4-212ENST00000470240 F5H6K3 240 aa8.79□□□□□ -1
SMC4-212ENST00000470240 RNF225M0QZC1 329 aaPredicted RBP8.79□□□□□ -1
SMC4-212ENST00000470240 ZIC2O95409 532 aaPredicted RBP8.79□□□□□ -1
SMC4-212ENST00000470240 NDUFB10O96000 172 aa8.79□□□□□ -1
SMC4-212ENST00000470240 SERPING1P05155 500 aa8.79□□□□□ -1
SMC4-212ENST00000470240 NR3C2P08235 984 aa8.79□□□□□ -1
SMC4-212ENST00000470240 EPB41P11171 864 aaKnown RBP8.79□□□□□ -1
SMC4-212ENST00000470240 TIMP2P16035 220 aa8.79□□□□□ -1
SMC4-212ENST00000470240 OAS2P29728 719 aaKnown RBP8.79□□□□□ -1
SMC4-212ENST00000470240 SREBF1P36956 1147 aa8.79□□□□□ -1
SMC4-212ENST00000470240 GRM5P41594 1212 aa8.79□□□□□ -1
SMC4-212ENST00000470240 MAGEA1P43355 309 aa8.79□□□□□ -1
SMC4-212ENST00000470240 STAT2P52630 851 aa8.79□□□□□ -1
SMC4-212ENST00000470240 NAP1L1P55209 391 aaKnown RBP8.79□□□□□ -1
SMC4-212ENST00000470240 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
SMC4-212ENST00000470240 AMPD2Q01433 879 aa8.79□□□□□ -1
SMC4-212ENST00000470240 KLRC3Q07444 240 aa8.79□□□□□ -1
SMC4-212ENST00000470240 EHHADHQ08426 723 aa8.79□□□□□ -1
SMC4-212ENST00000470240 NFIAQ12857 509 aa8.79□□□□□ -1
SMC4-212ENST00000470240 TNIP1Q15025 636 aa8.79□□□□□ -1
SMC4-212ENST00000470240 DACT2Q5SW24 774 aa8.79□□□□□ -1
SMC4-212ENST00000470240 LRRC55Q6ZSA7 311 aa8.79□□□□□ -1
SMC4-212ENST00000470240 FAM160B2Q86V87 743 aa8.79□□□□□ -1
SMC4-212ENST00000470240 RNF10Q8N5U6 811 aaKnown RBP8.79□□□□□ -1
SMC4-212ENST00000470240 ADAM32Q8TC27 787 aa8.79□□□□□ -1
SMC4-212ENST00000470240 LRRC15Q8TF66 581 aa8.79□□□□□ -1
SMC4-212ENST00000470240 CHURC1Q8WUH1 139 aa8.79□□□□□ -1
SMC4-212ENST00000470240 MBOAT7Q96N66 472 aa8.79□□□□□ -1
SMC4-212ENST00000470240 LSM14BQ9BX40 385 aaKnown RBP8.79□□□□□ -1
SMC4-212ENST00000470240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.79□□□□□ -14e-34■■■■■ 131.8
SMC4-212ENST00000470240 RNF14Q9UBS8 474 aa8.79□□□□□ -1
SMC4-212ENST00000470240 REXO2Q9Y3B8 237 aaKnown RBP8.79□□□□□ -1
SMC4-212ENST00000470240 HYOU1Q9Y4L1 999 aa8.79□□□□□ -1
SMC4-212ENST00000470240 PCDHA13Q9Y5I0 950 aa8.79□□□□□ -1
SMC4-212ENST00000470240 BZW2Q9Y6E2 419 aaKnown RBP8.79□□□□□ -1
SMC4-212ENST00000470240 UBE4BO95155 1302 aa8.79□□□□□ -1
SMC4-212ENST00000470240 RGPD3A6NKT7 1758 aaPredicted RBP8.78□□□□□ -1
SMC4-212ENST00000470240 RGPD4Q7Z3J3 1758 aa8.78□□□□□ -1
SMC4-212ENST00000470240 LOXHD1Q8IVV2 1947 aa8.78□□□□□ -1
SMC4-212ENST00000470240 KIF13BQ9NQT8 1826 aa8.78□□□□□ -1
SMC4-212ENST00000470240 LRRC53A6NM62 1247 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L15C9J2P7 530 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L13C9JLJ4 530 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L11C9JVI0 530 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L18D6R9N7 530 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L22D6RA61 530 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L17D6RBQ6 530 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L19D6RCP7 530 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L20D6RJB6 530 aa8.78□□□□□ -1
SMC4-212ENST00000470240 POLR3GO15318 223 aaPredicted RBP8.78□□□□□ -1
SMC4-212ENST00000470240 SLC16A3O15427 465 aaKnown RBP8.78□□□□□ -1
SMC4-212ENST00000470240 PPIP5K2O43314 1243 aa8.78□□□□□ -1
SMC4-212ENST00000470240 FAM13AO94988 1023 aa8.78□□□□□ -1
SMC4-212ENST00000470240 LCA5LO95447 670 aa8.78□□□□□ -1
SMC4-212ENST00000470240 TBC1D8O95759 1140 aa8.78□□□□□ -1
SMC4-212ENST00000470240 PRLRP16471 622 aa8.78□□□□□ -1
SMC4-212ENST00000470240 CYP11B2P19099 503 aa8.78□□□□□ -1
SMC4-212ENST00000470240 MUTP22033 750 aa8.78□□□□□ -1
SMC4-212ENST00000470240 ANXA13P27216 316 aa8.78□□□□□ -1
SMC4-212ENST00000470240 RPA1P27694 616 aa8.78□□□□□ -1
SMC4-212ENST00000470240 CIITAP33076 1130 aa8.78□□□□□ -1
SMC4-212ENST00000470240 EIF4A3P38919 411 aaKnown RBP8.78□□□□□ -1
SMC4-212ENST00000470240 TNNT3P45378 269 aaPredicted RBP8.78□□□□□ -1
SMC4-212ENST00000470240 PLA2G4AP47712 749 aa8.78□□□□□ -1
SMC4-212ENST00000470240 KLK7P49862 253 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP14P54578 494 aa8.78□□□□□ -1
SMC4-212ENST00000470240 SETQ01105 290 aaPredicted RBP8.78□□□□□ -1
SMC4-212ENST00000470240 ITIH3Q06033 890 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L24Q0WX57 530 aa8.78□□□□□ -1
SMC4-212ENST00000470240 ADAM9Q13443 819 aa8.78□□□□□ -1
SMC4-212ENST00000470240 ASIC2Q16515 512 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USH1GQ495M9 461 aa8.78□□□□□ -1
SMC4-212ENST00000470240 C10orf76Q5T2E6 689 aa8.78□□□□□ -1
SMC4-212ENST00000470240 USP17L6PQ6QN14 398 aa8.78□□□□□ -1
SMC4-212ENST00000470240 BTNL9Q6UXG8 535 aa8.78□□□□□ -1
SMC4-212ENST00000470240 FRMD5Q7Z6J6 570 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms