RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CPP00450 1065 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 GAP43P17677 238 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 KLRC3Q07444 240 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 RASGEF1CQ8N431 466 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 RUSC1Q9BVN2 902 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 FAM107BQ9H098 131 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 TAF1DQ9H5J8 278 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-209ENST00000470026 AJAP1Q9UKB5 411 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-209ENST00000470026 RSPH10B2B2RC85 870 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 TGFB1I1O43294 461 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 KRT14P02533 472 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 RSPH10BP0C881 870 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 NPR1P16066 1061 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 ICA1Q05084 483 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 CUL1Q13616 776 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 SYDE2Q5VT97 1194 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 EFCAB13Q8IY85 973 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 SLC30A5Q8TAD4 765 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 ZMYM2Q9UBW7 1377 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 IGLV3-22A0A075B6J6 115 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 SPDYE3A6NKU9 549 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 DDX3XO00571 662 aaKnown RBP eCLIP14.92□□□□□ -0.021e-8■■■□□ 17.6
BRCA1-209ENST00000470026 KCNK3O14649 394 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 NDUFB10O96000 172 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 CASP4P49662 377 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 ERVK-9P63128 1117 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 PODNQ7Z5L7 613 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 METTL13Q8N6R0 699 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 BCAS4Q8TDM0 211 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 IFT81Q8WYA0 676 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 HSD17B14Q9BPX1 270 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 EIF2AK1Q9BQI3 630 aaKnown RBP14.92□□□□□ -0.02
BRCA1-209ENST00000470026 SUCLA2Q9P2R7 463 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-209ENST00000470026 SYNPO2Q9UMS6 1093 aa14.92□□□□□ -0.02
BRCA1-209ENST00000470026 FAM196BA6NMK8 535 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 EML1O00423 815 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 CCT5P48643 541 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 DNA2P51530 1060 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 TRADDQ15628 312 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 ENOX2Q16206 610 aaKnown RBP14.91□□□□□ -0.02
BRCA1-209ENST00000470026 RINT1Q6NUQ1 792 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 LRIG3Q6UXM1 1119 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.91□□□□□ -0.02
BRCA1-209ENST00000470026 SYT11Q9BT88 431 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 MKNK1Q9BUB5 465 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 BHMT2Q9H2M3 363 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 TUFT1Q9NNX1 390 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 RABGAP1Q9Y3P9 1069 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 COL11A2P13942 1736 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-209ENST00000470026 RBBP6Q7Z6E9 1792 aaKnown RBP14.91□□□□□ -0.02
BRCA1-209ENST00000470026 ATXN2Q99700 1313 aaKnown RBP14.91□□□□□ -0.02
BRCA1-209ENST00000470026 ATRNL1Q5VV63 1379 aa14.91□□□□□ -0.02
BRCA1-209ENST00000470026 SRRM3A6NNA2 597 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-209ENST00000470026 CCDC188H7C350 402 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 H2AFZP0C0S5 128 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 FERP16591 822 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 H2AFVQ71UI9 128 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 PPM1EQ8WY54 764 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 SEC14L1Q92503 715 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 ZFP91Q96JP5 570 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-209ENST00000470026 BCAS3Q9H6U6 928 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 TTC7AQ9ULT0 858 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-209ENST00000470026 A0A087WUV0 522 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-209ENST00000470026 PGRMC1O00264 195 aaKnown RBP14.9□□□□□ -0.02
BRCA1-209ENST00000470026 EBAG9O00559 213 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 TBCAO75347 108 aaKnown RBP14.9□□□□□ -0.02
BRCA1-209ENST00000470026 POLD1P28340 1107 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 ALDH1B1P30837 517 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 DCAF17Q5H9S7 520 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-209ENST00000470026 C1orf186Q6ZWK4 172 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 VPS36Q86VN1 386 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 SH2D3CQ8N5H7 860 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 LMBR1Q8WVP7 490 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 HES6Q96HZ4 224 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 FIZ1Q96SL8 496 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 PAGR1Q9BTK6 254 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 GCNT4Q9P109 453 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 PCDHAC2Q9Y5I4 1007 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 NCANO14594 1321 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 UBE4BO95155 1302 aa14.9□□□□□ -0.02
BRCA1-209ENST00000470026 COL2A1P02458 1487 aaPredicted RBP14.9□□□□□ -0.02
BRCA1-209ENST00000470026 SHTN1A0MZ66 631 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 HMGB1P1B2RPK0 211 aaPredicted RBP14.89□□□□□ -0.03
BRCA1-209ENST00000470026 H0YGN5 161 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 GCNT3O95395 438 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 MUTP22033 750 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 GUCY2FP51841 1108 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 SNAP25P60880 206 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 KCNA1Q09470 495 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 TCP10Q12799 353 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 STRIP1Q5VSL9 837 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 NT5DC3Q86UY8 548 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 KLHL7Q8IXQ5 586 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 SYCE1Q8N0S2 351 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 CYP2W1Q8TAV3 490 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 ATP6V1G3Q96LB4 118 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 DMAC2Q9NW81 257 aa14.89□□□□□ -0.03
BRCA1-209ENST00000470026 NOC2LQ9Y3T9 749 aaKnown RBP14.89□□□□□ -0.03
BRCA1-209ENST00000470026 DAAM1Q9Y4D1 1078 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms