RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 NCLP19338 710 aaKnown RBP14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 KLRC1P26715 233 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 CYP4A11Q02928 519 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 MLLT1Q03111 559 aaPredicted RBP14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 TBC1D8BQ0IIM8 1120 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 MARCH8Q5T0T0 291 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 ADALQ6DHV7 355 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 MTHFD1LQ6UB35 978 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 CABP7Q86V35 215 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 LEO1Q8WVC0 666 aaPredicted RBP14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 SLC7A3Q8WY07 619 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 CEP170P1Q96L14 293 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 CCDC43Q96MW1 224 aaKnown RBP14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 FTOQ9C0B1 505 aaKnown RBP eCLIP14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 CSRNP2Q9H175 543 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 TRPV6Q9H1D0 765 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 CYP26B1Q9NR63 512 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 TRMT13Q9NUP7 481 aaKnown RBP14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 KCND2Q9NZV8 630 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 KCNG1Q9UIX4 513 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 TBX21Q9UL17 535 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 KIAA1024Q9UPX6 916 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 DOCK5Q9H7D0 1870 aa14.1□□□□□ -0.15
SPTLC1-204ENST00000469778 MYH9P35579 1960 aaKnown RBP14.09□□□□□ -0.15
SPTLC1-204ENST00000469778 MAFO75444 373 aaPredicted RBP14.09□□□□□ -0.15
SPTLC1-204ENST00000469778 MED24O75448 989 aa14.09□□□□□ -0.15
SPTLC1-204ENST00000469778 XKR9Q5GH70 373 aa14.09□□□□□ -0.15
SPTLC1-204ENST00000469778 IER5Q5VY09 327 aa14.09□□□□□ -0.15
SPTLC1-204ENST00000469778 CCDC73Q6ZRK6 1079 aa14.09□□□□□ -0.15
SPTLC1-204ENST00000469778 TCP11Q8WWU5 503 aa14.09□□□□□ -0.15
SPTLC1-204ENST00000469778 MMTAG2Q9BU76 263 aaKnown RBP14.09□□□□□ -0.15
SPTLC1-204ENST00000469778 FAM13BQ9NYF5 915 aa14.09□□□□□ -0.15
SPTLC1-204ENST00000469778 IGKV6-21A0A0C4DH24 114 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 A0A1W2PQ27 194 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 A0A1W2PQ64 194 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 A0A1W2PQD8 194 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 ASAP2O43150 1006 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 TREHO43280 583 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 CAPN15O75808 1086 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 C22orf31O95567 290 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 EYA4O95677 639 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 TIMP1P01033 207 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 CYP2C9P11712 490 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 CMA1P23946 247 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 RFC2P35250 354 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 IGBP1P78318 339 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 FOXD4L6Q3SYB3 417 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 AXDND1Q5T1B0 1012 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 FOXD4L3Q6VB84 417 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 MCPH1Q8NEM0 835 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 RASSF8Q8NHQ8 419 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 CTAGE1Q96RT6 745 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 TIPINQ9BVW5 301 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 HIPK3Q9H422 1215 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 CUEDC2Q9H467 287 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 DHX33Q9H6R0 707 aaKnown RBP14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 PDLIM7Q9NR12 457 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 DDX19AQ9NUU7 478 aaKnown RBP14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 WRAP73Q9P2S5 460 aaPredicted RBP14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 STK17AQ9UEE5 414 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 PCDHA7Q9UN72 937 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 SQORQ9Y6N5 450 aa14.08□□□□□ -0.16
SPTLC1-204ENST00000469778 ARHGEF35A5YM69 484 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 RAG1P15918 1043 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 SELPP16109 830 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 RARRES1P49788 294 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 MTERF2Q49AM1 385 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 TMEM119Q4V9L6 283 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 FAM26DQ5JW98 314 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 CLEC17AQ6ZS10 378 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 TMEM199Q8N511 208 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 USP38Q8NB14 1042 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 SYMPKQ92797 1274 aaKnown RBP14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 CEP89Q96ST8 783 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 MAP7D2Q96T17 732 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 NOC4LQ9BVI4 516 aaKnown RBP14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 LRRC27Q9C0I9 530 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 USP25Q9UHP3 1055 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 KAT6AQ92794 2004 aa14.07□□□□□ -0.16
SPTLC1-204ENST00000469778 GOLGA6L4A6NEF3 574 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 PP2D1A8MPX8 630 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 M0QZ92 97 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 PFKMP08237 780 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 CYP11B2P19099 503 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 CDC25AP30304 524 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 POLGP54098 1239 aaPredicted RBP14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 MXD4Q14582 209 aaPredicted RBP14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 TRIM71Q2Q1W2 868 aaKnown RBP14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 RRAGBQ5VZM2 374 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 MFSD5Q6N075 450 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 EFCAB12Q6NXP0 572 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 POTEGQ6S5H5 508 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 PADI6Q6TGC4 694 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 C7orf61Q8IZ16 206 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 RPUSD2Q8IZ73 545 aaKnown RBP14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 KIAA0319LQ8IZA0 1049 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 METTL13Q8N6R0 699 aa14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 SYT2Q8N9I0 419 aaPredicted RBP14.06□□□□□ -0.16
SPTLC1-204ENST00000469778 IQUBQ8NA54 791 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms