RNA–Protein interactions for RNA: ENST00000469704.1

SNX5-206, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-206ENST00000469704 ZNF862O60290 1169 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 CCNT1O60563 726 aaKnown RBP30.03■■■□□ 2.4
SNX5-206ENST00000469704 JAK2O60674 1132 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 ARHGEF15O94989 841 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 C22orf31O95567 290 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 MMP1P03956 469 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 OATP04181 439 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 IGFBP4P22692 258 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 TRIM29Q14134 588 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 FAM117BQ6P1L5 589 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 IL27Q8NEV9 243 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 LLPHQ9BRT6 129 aaKnown RBP30.03■■■□□ 2.4
SNX5-206ENST00000469704 FTHL17Q9BXU8 183 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 A0A0C4DFX4 3053 aa30.03■■■□□ 2.4
SNX5-206ENST00000469704 TRANK1O15050 2925 aa30.02■■■□□ 2.4
SNX5-206ENST00000469704 ENPP3O14638 875 aa30.02■■■□□ 2.4
SNX5-206ENST00000469704 SLC37A4O43826 429 aa30.02■■■□□ 2.4
SNX5-206ENST00000469704 TMEM62Q0P6H9 643 aa30.02■■■□□ 2.4
SNX5-206ENST00000469704 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.02■■■□□ 2.43e-39■■■□□ 15.6
SNX5-206ENST00000469704 TNFRSF25Q93038 417 aa30.02■■■□□ 2.4
SNX5-206ENST00000469704 AGO3Q9H9G7 860 aaKnown RBP30.02■■■□□ 2.4
SNX5-206ENST00000469704 UNC80Q8N2C7 3258 aa30.01■■■□□ 2.39
SNX5-206ENST00000469704 RBAK-RBAKDNI3L0D1 243 aa30.01■■■□□ 2.39
SNX5-206ENST00000469704 ST3GAL1Q11201 340 aa30.01■■■□□ 2.39
SNX5-206ENST00000469704 NR5A1Q13285 461 aa30.01■■■□□ 2.39
SNX5-206ENST00000469704 TRMT1LQ7Z2T5 733 aaKnown RBP30.01■■■□□ 2.39
SNX5-206ENST00000469704 ZNF710Q8N1W2 664 aa30.01■■■□□ 2.39
SNX5-206ENST00000469704 SP7Q8TDD2 431 aaPredicted RBP30.01■■■□□ 2.39
SNX5-206ENST00000469704 ARNTL2Q8WYA1 636 aa30.01■■■□□ 2.39
SNX5-206ENST00000469704 TGS1Q96RS0 853 aaKnown RBP30.01■■■□□ 2.39
SNX5-206ENST00000469704 CERS4Q9HA82 394 aa30.01■■■□□ 2.39
SNX5-206ENST00000469704 SH2B1Q9NRF2 756 aaPredicted RBP30.01■■■□□ 2.39
SNX5-206ENST00000469704 PRUNE2Q8WUY3 3088 aa30.01■■■□□ 2.39
SNX5-206ENST00000469704 LINC01553A4QN01 128 aa30■■■□□ 2.39
SNX5-206ENST00000469704 CD52P31358 61 aa30■■■□□ 2.39
SNX5-206ENST00000469704 ERVK-21P61565 698 aa30■■■□□ 2.39
SNX5-206ENST00000469704 PRKCEQ02156 737 aa30■■■□□ 2.39
SNX5-206ENST00000469704 PPP2R5CQ13362 524 aa30■■■□□ 2.39
SNX5-206ENST00000469704 EARS2Q5JPH6 523 aaKnown RBP30■■■□□ 2.39
SNX5-206ENST00000469704 KRT40Q6A162 431 aa30■■■□□ 2.39
SNX5-206ENST00000469704 PADI3Q9ULW8 664 aa30■■■□□ 2.39
SNX5-206ENST00000469704 UPP2O95045 317 aa29.99■■■□□ 2.39
SNX5-206ENST00000469704 TMOD1P28289 359 aa29.99■■■□□ 2.39
SNX5-206ENST00000469704 XKR3Q5GH77 459 aa29.99■■■□□ 2.39
SNX5-206ENST00000469704 ODR4Q5SWX8 454 aa29.99■■■□□ 2.39
SNX5-206ENST00000469704 METTL13Q8N6R0 699 aa29.99■■■□□ 2.39
SNX5-206ENST00000469704 TTC3P53804 2025 aa29.99■■■□□ 2.39
SNX5-206ENST00000469704 BTBD18B2RXH4 712 aa29.98■■■□□ 2.39
SNX5-206ENST00000469704 UGCGQ16739 394 aa29.98■■■□□ 2.39
SNX5-206ENST00000469704 CCDC83Q8IWF9 413 aa29.98■■■□□ 2.39
SNX5-206ENST00000469704 DIS3L2Q8IYB7 885 aaKnown RBP29.98■■■□□ 2.39
SNX5-206ENST00000469704 YME1L1Q96TA2 773 aa29.98■■■□□ 2.39
SNX5-206ENST00000469704 NIFKQ9BYG3 293 aaKnown RBP29.98■■■□□ 2.39
SNX5-206ENST00000469704 RFXAPO00287 272 aa29.97■■■□□ 2.39
SNX5-206ENST00000469704 GTPBP6O43824 516 aaPredicted RBP29.97■■■□□ 2.39
SNX5-206ENST00000469704 MARCH6O60337 910 aa29.97■■■□□ 2.39
SNX5-206ENST00000469704 BAG4O95429 457 aaKnown RBP29.97■■■□□ 2.39
SNX5-206ENST00000469704 CRYBB1P53674 252 aaPredicted RBP29.97■■■□□ 2.39
SNX5-206ENST00000469704 PAK2Q13177 524 aa29.97■■■□□ 2.39
SNX5-206ENST00000469704 TARBP2Q15633 366 aaKnown RBP29.97■■■□□ 2.39
SNX5-206ENST00000469704 EFCAB12Q6NXP0 572 aa29.97■■■□□ 2.39
SNX5-206ENST00000469704 SLFN12Q8IYM2 578 aa29.97■■■□□ 2.39
SNX5-206ENST00000469704 HAS1Q92839 578 aa29.97■■■□□ 2.39
SNX5-206ENST00000469704 VAV3Q9UKW4 847 aa29.97■■■□□ 2.39
SNX5-206ENST00000469704 EPOPA6NHQ4 379 aa29.96■■■□□ 2.39
SNX5-206ENST00000469704 DKC1O60832 514 aaKnown RBP eCLIP29.96■■■□□ 2.391e-323■■□□□ 13.1
SNX5-206ENST00000469704 PSMC5P62195 406 aa29.96■■■□□ 2.39
SNX5-206ENST00000469704 HMGN5P82970 282 aaKnown RBP29.96■■■□□ 2.39
SNX5-206ENST00000469704 LINC01465Q8N7H1 131 aa29.96■■■□□ 2.39
SNX5-206ENST00000469704 SAMD11Q96NU1 681 aa29.96■■■□□ 2.39
SNX5-206ENST00000469704 UPF2Q9HAU5 1272 aaKnown RBP29.96■■■□□ 2.39
SNX5-206ENST00000469704 LMCD1Q9NZU5 365 aa29.96■■■□□ 2.39
SNX5-206ENST00000469704 MTCH2Q9Y6C9 303 aa29.96■■■□□ 2.39
SNX5-206ENST00000469704 RPS6KA5O75582 802 aa29.95■■■□□ 2.39
SNX5-206ENST00000469704 RABEP1Q15276 862 aa29.95■■■□□ 2.39
SNX5-206ENST00000469704 SAFBQ15424 915 aaKnown RBP eCLIP29.95■■■□□ 2.39
SNX5-206ENST00000469704 RTN4RL1Q86UN2 441 aaPredicted RBP29.95■■■□□ 2.39
SNX5-206ENST00000469704 MAP7D2Q96T17 732 aa29.95■■■□□ 2.39
SNX5-206ENST00000469704 CDHR5Q9HBB8 845 aa29.95■■■□□ 2.39
SNX5-206ENST00000469704 GINS2Q9Y248 185 aa29.95■■■□□ 2.39
SNX5-206ENST00000469704 PRRC2BQ5JSZ5 2229 aaKnown RBP29.95■■■□□ 2.38
SNX5-206ENST00000469704 COL4A6Q14031 1691 aa29.95■■■□□ 2.38
SNX5-206ENST00000469704 FAM205CA6NFA0 338 aa29.94■■■□□ 2.38
SNX5-206ENST00000469704 GPR182O15218 404 aa29.94■■■□□ 2.38
SNX5-206ENST00000469704 GPR32O75388 356 aa29.94■■■□□ 2.38
SNX5-206ENST00000469704 STBD1O95210 358 aa29.94■■■□□ 2.38
SNX5-206ENST00000469704 TBC1D8BQ0IIM8 1120 aa29.94■■■□□ 2.38
SNX5-206ENST00000469704 SPRED2Q7Z698 418 aa29.94■■■□□ 2.38
SNX5-206ENST00000469704 POTEDQ86YR6 584 aa29.94■■■□□ 2.38
SNX5-206ENST00000469704 TSPYL2Q9H2G4 693 aaPredicted RBP29.94■■■□□ 2.38
SNX5-206ENST00000469704 NOC2LQ9Y3T9 749 aaKnown RBP29.94■■■□□ 2.38
SNX5-206ENST00000469704 EML1O00423 815 aa29.93■■■□□ 2.38
SNX5-206ENST00000469704 P4HBP07237 508 aaKnown RBP29.93■■■□□ 2.38
SNX5-206ENST00000469704 QARSP47897 775 aaKnown RBP29.93■■■□□ 2.38
SNX5-206ENST00000469704 GRB10Q13322 594 aa29.93■■■□□ 2.38
SNX5-206ENST00000469704 KIZQ2M2Z5 673 aa29.93■■■□□ 2.38
SNX5-206ENST00000469704 PPM1EQ8WY54 764 aa29.93■■■□□ 2.38
SNX5-206ENST00000469704 C8orf76Q96K31 380 aa29.93■■■□□ 2.38
SNX5-206ENST00000469704 SUGCTQ9HAC7 445 aa29.93■■■□□ 2.38
SNX5-206ENST00000469704 ERVK-5Q9HDB9 667 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms