RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 AKR1B10O60218 316 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 SCG2P13521 617 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 NFKBIAP25963 317 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 LSP1P33241 339 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 CACNB1Q02641 598 aaPredicted RBP10.8□□□□□ -0.68
NUP50-214ENST00000469163 CYP4A11Q02928 519 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 SPRED3Q2MJR0 410 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 ANO1Q5XXA6 986 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 ZNF365Q70YC5 407 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 SH2D3CQ8N5H7 860 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 AGAP11Q8TF27 550 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 ZNF512BQ96KM6 892 aaPredicted RBP10.8□□□□□ -0.68
NUP50-214ENST00000469163 CCDC43Q96MW1 224 aaKnown RBP10.8□□□□□ -0.68
NUP50-214ENST00000469163 MPHOSPH6Q99547 160 aaKnown RBP10.8□□□□□ -0.68
NUP50-214ENST00000469163 FAM198AQ9UFP1 575 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 ADAMTS3O15072 1205 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 HARSP12081 509 aaKnown RBP10.8□□□□□ -0.68
NUP50-214ENST00000469163 ZNF569Q5MCW4 686 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 CAPN12Q6ZSI9 719 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 HPS3Q969F9 1004 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 MRGBPQ9NV56 204 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 SLC5A4Q9NY91 659 aa10.8□□□□□ -0.68
NUP50-214ENST00000469163 PALM3A6NDB9 673 aaPredicted RBP10.79□□□□□ -0.68
NUP50-214ENST00000469163 SPDYE2BA6NHP3 402 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 ARHGAP6O43182 974 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 SERPINC1P01008 464 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 SPDYE6P0CI01 402 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 TECP42680 631 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 SYKP43405 635 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 MTMR2Q13614 643 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 EARS2Q5JPH6 523 aaKnown RBP10.79□□□□□ -0.68
NUP50-214ENST00000469163 TBC1D1Q86TI0 1168 aaPredicted RBP10.79□□□□□ -0.68
NUP50-214ENST00000469163 NLRP14Q86W24 1093 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 LONP2Q86WA8 852 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 SMYD4Q8IYR2 804 aaPredicted RBP10.79□□□□□ -0.68
NUP50-214ENST00000469163 EPSTI1Q96J88 318 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 EPN3Q9H201 632 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 PCDH18Q9HCL0 1135 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 PCDHA7Q9UN72 937 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 R3HDM2Q9Y2K5 976 aaKnown RBP10.79□□□□□ -0.68
NUP50-214ENST00000469163 GOLGA6L10A0A0M3HER8 536 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 A6NNZ2 444 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 HNRNPRO43390 633 aaKnown RBP10.79□□□□□ -0.68
NUP50-214ENST00000469163 PEX14O75381 377 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 HOXD12P35452 270 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 UBA7P41226 1012 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 PDE6CP51160 858 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 NDUFA8P51970 172 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 SF3A3Q12874 501 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP50-214ENST00000469163 TUBB8Q3ZCM7 444 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 ANKRD20A8PQ5CZ79 823 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 PEX5LQ8IYB4 626 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 SMC1BQ8NDV3 1235 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 CCHCR1Q8TD31 782 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 CEP295NLQ96MC4 621 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 OXCT2Q9BYC2 517 aaPredicted RBP10.79□□□□□ -0.68
NUP50-214ENST00000469163 ELP3Q9H9T3 547 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 TOP1P11387 765 aaKnown RBP10.79□□□□□ -0.68
NUP50-214ENST00000469163 KCNA3P22001 575 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 KIF23Q02241 960 aaPredicted RBP10.79□□□□□ -0.68
NUP50-214ENST00000469163 PTGDRQ13258 359 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 SLC44A4Q53GD3 710 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 FKBP15Q5T1M5 1219 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 NOSTRINQ8IVI9 506 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP50-214ENST00000469163 ZNF711Q9Y462 761 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 BRWD3Q6RI45 1802 aa10.79□□□□□ -0.68
NUP50-214ENST00000469163 TUBP50607 506 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 OXCT1P55809 520 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 KLC1Q07866 573 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 TMEM154Q6P9G4 183 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 DYMQ7RTS9 669 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 SLC15A3Q8IY34 581 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 CCDC63Q8NA47 563 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 EHBP1Q8NDI1 1231 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 MYCBPAPQ8TBZ2 947 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 ABHD8Q96I13 439 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 OSBPL7Q9BZF2 842 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 RETREG1Q9H6L5 497 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 RAVER2Q9HCJ3 691 aaKnown RBP10.78□□□□□ -0.68
NUP50-214ENST00000469163 DLGAP2Q9P1A6 1054 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 C4BP0C0L5 1744 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 GOLGA8KD6RF30 607 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 TRAF5O00463 557 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 TUBB4BP68371 445 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 TROAPQ12815 778 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 PNOCQ13519 176 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 PRR16Q569H4 304 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 ANKRD20A2Q5SQ80 823 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 ANKRD20A1Q5TYW2 823 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 ANKRD20A3Q5VUR7 823 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 LMBRD2Q68DH5 695 aaPredicted RBP10.78□□□□□ -0.68
NUP50-214ENST00000469163 TOGARAM2Q6ZUX3 1019 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 SREK1Q8WXA9 508 aaKnown RBP10.78□□□□□ -0.68
NUP50-214ENST00000469163 HVCN1Q96D96 273 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 NAF1Q96HR8 494 aaKnown RBP10.78□□□□□ -0.68
NUP50-214ENST00000469163 CLMNQ96JQ2 1002 aa10.78□□□□□ -0.68
NUP50-214ENST00000469163 SELENOOQ9BVL4 669 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms