RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 NPAS4Q8IUM7 802 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 SMAP1Q8IYB5 467 aaPredicted RBP16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 BBXQ8WY36 941 aaPredicted RBP16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 TM6SF1Q9BZW5 370 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 ERVK-5Q9HDB9 667 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 CD320Q9NPF0 282 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 SH3GLB2Q9NR46 395 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 VPS54Q9P1Q0 977 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 NOC2LQ9Y3T9 749 aaKnown RBP16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 RWDD3Q9Y3V2 267 aa16.78■□□□□ 0.28
SDCCAG3-209ENST00000468963 MYH9P35579 1960 aaKnown RBP16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 C22orf31O95567 290 aa16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 PSAPP07602 524 aa16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 TMEM266Q2M3C6 531 aa16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 CMTR2Q8IYT2 770 aaKnown RBP16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 CCDC148Q8NFR7 591 aa16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 TMEM40Q8WWA1 233 aa16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 ZNF274Q96GC6 653 aaPredicted RBP16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 C11orf84Q9BUA3 381 aaPredicted RBP16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 PLVAPQ9BX97 442 aa16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 LMAN2LQ9H0V9 348 aa16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 NSUN3Q9H649 340 aaKnown RBP16.77■□□□□ 0.28
SDCCAG3-209ENST00000468963 RALGAPA2Q2PPJ7 1873 aa16.77■□□□□ 0.27
SDCCAG3-209ENST00000468963 GRXCR2A6NFK2 248 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 MSH4O15457 936 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 MGEA5O60502 916 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 STAG3L1P0CL83 205 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 COL9A1P20849 921 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 NFX1Q12986 1120 aaKnown RBP16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 CAMK1Q14012 370 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 PABPC5Q96DU9 382 aaKnown RBP16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 EPHX3Q9H6B9 360 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 GABBR1Q9UBS5 961 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 ST3GAL5Q9UNP4 418 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 PLAGL2Q9UPG8 496 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 CYP46A1Q9Y6A2 500 aa16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 MRPL42Q9Y6G3 142 aaKnown RBP16.76■□□□□ 0.27
SDCCAG3-209ENST00000468963 M0R2N6 131 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 GPR32O75388 356 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 RPS6KA5O75582 802 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 LTBRP36941 435 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 SARSP49591 514 aaKnown RBP16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 CRYBB1P53674 252 aaPredicted RBP16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 NLRP5P59047 1200 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 SSRP1Q08945 709 aaKnown RBP16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 CTC1Q2NKJ3 1217 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 FAM178BQ8IXR5 827 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 CKAP2LQ8IYA6 745 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 LINC01465Q8N7H1 131 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 SLC5A5Q92911 643 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 P2RX5Q93086 422 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 LARP6Q9BRS8 491 aaKnown RBP16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 C1QTNF1Q9BXJ1 281 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 RGS18Q9NS28 235 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 GINS2Q9Y248 185 aa16.75■□□□□ 0.27
SDCCAG3-209ENST00000468963 H3BQ06 376 aaPredicted RBP16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 MAGEB2O15479 319 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 NCK2O43639 380 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 ZNF862O60290 1169 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 IL9P15248 144 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 GATMP50440 423 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 FAM189BP81408 668 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 PUS10Q3MIT2 529 aaKnown RBP16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 NAALADL2Q58DX5 795 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 PTCRAQ6ISU1 281 aaPredicted RBP16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 TRMT1LQ7Z2T5 733 aaKnown RBP16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 SPPL3Q8TCT6 385 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 RIT2Q99578 217 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 ADAM2Q99965 735 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 ALG13Q9NP73 1137 aaKnown RBP16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 PCDHA4Q9UN74 947 aa16.74■□□□□ 0.27
SDCCAG3-209ENST00000468963 WDR81Q562E7 1941 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 CYP3A7-CYP3A51PA0A087WV96 503 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 WDR64B1ANS9 1081 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 C9IYK1 514 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 GPR182O15218 404 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 VTNP04004 478 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 CYP3A7P24462 503 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 DNAJB1P25685 340 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 HYAL1Q12794 435 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 DSC3Q14574 896 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 NPY5RQ15761 445 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 KIZQ2M2Z5 673 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 Q4G0T1 1027 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 ODR4Q5SWX8 454 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 SLC24A5Q71RS6 500 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 FAM228AQ86W67 206 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 METTL13Q8N6R0 699 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 TBCKQ8TEA7 893 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 FAM167AQ96KS9 214 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 NRBP2Q9NSY0 501 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 CEP131Q9UPN4 1083 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 SAMM50Q9Y512 469 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 PCDHB7Q9Y5E2 793 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 C5orf42Q9H799 3197 aa16.73■□□□□ 0.27
SDCCAG3-209ENST00000468963 PSMD10O75832 226 aa16.72■□□□□ 0.27
SDCCAG3-209ENST00000468963 DEXIO95424 95 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms